Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25]
3,306 sequences; 462,505,359 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq3107 286 9e-72
seq314 147 6e-30
seq2718 102 2e-16
>seq3107
Length=1323484
Score = 286 bits (316), Expect = 9e-72
Identities = 1120/1747 (64%), Gaps = 43/1747 (2%)
Strand=Plus/Minus
Query 363433 AATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCAT 363492
||||| | |||||||| || || ||||||||||||||||||||||| || ||||| |||
Sbjct 936201 AATGGCAAAATTGTTGAGCGACCACAGCATATGTTAATGCGTGTTGCCATCGGTATACAT 936142
Query 363493 TGCCCGGATGTTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTATTCACG 363552
|| || | ||||| || || |||||||| || | || | ||| || |||
Sbjct 936141 GGCGAAGACATAGATGCAGCAATCGAAACATACAACTTGCTTTCCGAACGTTATTTTACG 936082
Query 363553 CACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTT 363612
|| || | ||||| | | | ||||| || | || || |||| || ||||||
Sbjct 936081 CATGCTTCTCCAACGCTATTCGCTGCTGCCACCAAGCAGCCGCAATTGTCATCATGCTTT 936022
Query 363613 CTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACA----CACTTAAGAATTG 363668
|| || | ||| |||||||||||| || || || ||| ||| ||| | | ||
Sbjct 936021 CTACTGACCATGGTGGACGATTCCATTGATGGGAT-TTTCACATCGGCACATCAA---TG 935966
Query 363669 TGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCC-ACAATG--TTCGTGC 363725
||| | |||||||| ||| || || |||||| | || | ||| || | |||||
Sbjct 935965 TGCATTGATTTCCAAATCTGCTGGGGGTATTGGTCT---GAACGTACATTGCATACGTGC 935909
Query 363726 ACAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCG 363785
| | || | ||| || ||| || || || || |||| || ||| | ||
Sbjct 935908 AAAAGGCACTGCAATTGCGGGTACAAATGGCACATCAAACGGTTTGGTGCCTATGTTGCG 935849
Query 363786 TGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTT 363845
||||| | ||| || | || || || || ||||| || || || ||| || ||
Sbjct 935848 AGTGTTCAATAATGTAGCACGCTATGTGGATCAAGGTGGCGGTAAACGTCCAGGCGCATT 935789
Query 363846 TGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAA 363905
||| || || || || || ||||| |||||||| | ||| | || | ||||||
Sbjct 935788 TGCCATCTACCTGGAACCATGGCATGCTGATATTTTCCAATTTTTGGATTTGAAGAAAAA 935729
Query 363906 CACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCA 363965
||| || ||||| || || || | ||| |||| ||||| | ||| | |||| |
Sbjct 935728 CACTGGGAAAGAAGAGCATCGCGCCAGAGATTTGTTTTATGCTTTGTGGATACCTGATCT 935669
Query 363966 TTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCC 364025
|||||||| || || || || | | | ||||| || | || |||||| | |||||
Sbjct 935668 ATTTATGAAACGTGTAGAAGCCAATGAAGACTGGTCGCTAATGTGTCCACACAAGTGTCC 935609
Query 364026 AGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGA 364085
||||| || ||||||||||| || | | |||| || |||||| |||
Sbjct 935608 CGGTCTACATGAAGTATGGGGTGAAGAGTTCGAAAAATTATATCTGAAATATGAACAGGA 935549
Query 364086 GGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCA 364145
||| ||| ||||| | | ||||| | || |||||| ||| || || |||||
Sbjct 935548 AGGACGTGCTAATAAGAAAGTAAAAGCACAAAGTCTTTGGTTTAGCATTATTGAATCGCA 935489
Query 364146 GATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCA 364205
| ||||| || ||||| || |||||||| |||||| | || || || ||| || ||
Sbjct 935488 AGTGGAGACCGGCACACCATACATGTTGTATAAAGATGCTTGTAATCGAAAGAGTAATCA 935429
Query 364206 GCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGC 364265
||| | ||||||||||| || || || |||||||||| ||| | ||||| | ||
Sbjct 935428 ACAGAATGTTGGTACAATTAAGTGTAGTAATTTATGTACCGAAATTGTGGAATATTCAGC 935369
Query 364266 TCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAAA-- 364323
|| || ||| || || || ||| | || || |||||| | |||||| | |
Sbjct 935368 ACCTGATGAGGTAGCTGTGTGCAACTTGGCTTCAATCGCGTTGAATATGTTTGTCACACC 935309
Query 364324 -GATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCT 364382
|| || | ||| ||| || | || || ||| | | ||| | ||| |
Sbjct 935308 CGAAAAAACGTACGACTTTAAGCGCCTCAAAGAGGTCACCAAAACCGTTACACGTAATTT 935249
Query 364383 CGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCG 364442
| || | || |||| ||| ||||||| | || || || | || ||| | |
Sbjct 935248 GAATAAAATAATAGACATTAATCATTATCCCTTACCGGAGGCAAGGAAATCGAATTTCAG 935189
Query 364443 TCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTT---TTATGATGC---- 364495
||||| || || ||| |||| |||||||| | ||||||| || || | ||||
Sbjct 935188 ACATCGTCCCATCGGTATTGGAGTACAGGGTTTTGCTGACGCTTTAATTTTAATGCGTTA 935129
Query 364496 TCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAA 364555
|| | | | | | | || | || || | ||| || | || || |||||||
Sbjct 935128 TCCATACGAAAGTGAAGAAGCATTAC-------TTTTGAATCAGCAAATATTCGAAACAA 935076
Query 364556 TGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGC--AAAAACCAAGGGAAAGTACTC 364613
| || | || ||| || ||| || || || || |||||| || ||
Sbjct 935075 TTTACTATGGCGCCTTGGAAGCTAGTTGCGAATTAGCCGAAAAAC--TTGGCCCCTATGA 935018
Query 364614 TACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCAC 364673
||||| || || || || || |||| | | |||| ||| | ||| || ||
Sbjct 935017 AACTTACGAAGGTTCACCCGTTAGTAAGGGTATTCTACAGTATGACATGTGGGATAAAAC 934958
Query 364674 GCCATCTGTCCGATGGAACTGG---GATACGCTACGTTCCAACGTTAAGAAGCATGGTAC 364730
||| ||| | ||||| ||| || | | | || | ||| | ||||||
Sbjct 934957 ACCAACTGATCTTTGGAATTGGACCGAATTG--AAG-GAGAAAATAAAGCAACATGGTGT 934901
Query 364731 TCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAA 364790
|||||||| | | ||||||||||| || ||||| || ||||| || | || ||
Sbjct 934900 CCGCAACTCTTTACTGCTTGCGCCCATGCCAACTGCTTCAACAGCACAAATTATGGGCAA 934841
Query 364791 CAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGA 364850
||| |||| || ||||| | || |||| ||||| |||| || || ||||| || ||
Sbjct 934840 CAATGAGTCATTTGAACCATACACTTCCAATATTTATACACGTCGTGTGCTTTCAGGTGA 934781
Query 364851 ATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGA 364910
||||| || || ||| | || | | ||||| |||| || |||||| |||
Sbjct 934780 ATTTCAAGTTGTAAATCATCACTTGTTGCGCGATCTAACCGAGTTGGGTTTGTGGGATGA 934721
Query 364911 CAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCC 364970
|||||||| |||| || || | || || | || || ||| | | ||
Sbjct 934720 TGATATGAAGAATAATATTATAACCAGTCGCGGCTCCATACAAAATATTGAATCCATACC 934661
Query 364971 AGAAGATCTGAAGC-CTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTG 365029
| || | | || | | |||||||| || ||||| |||||| || ||| ||
Sbjct 934660 A-CAGCACATACGCGATCTATACAAAACTGTTTGGGAGATTTCCGTGAAAACATCAATCA 934602
Query 365030 ATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGA 365089
| ||||| || ||||||||||| || ||| ||| || |||||||| ||| || | ||
Sbjct 934601 AAATGGCTGCAGATCGCGGTGCATTCATCGATCAAAGTCAGTCGTTCAACATACACGTGG 934542
Query 365090 CTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTA 365149
|| |||| | || | |||||||| || || ||||||| ||| ||||| | ||||| |
Sbjct 934541 CTGAGCCCAACTATGGTAAGCTTACTTCTATACATTTCTTCGGCTGGAAGGCAGGTCTCA 934482
Query 365150 AGACAGG 365156
|||| ||
Sbjct 934481 AGACGGG 934475
>seq314
Length=932230
Score = 147 bits (162), Expect = 6e-30
Identities = 419/636 (66%), Gaps = 6/636 (1%)
Strand=Plus/Minus
Query 111290 AATGCGTTTTAATCTGTCAACTCATTTTCCACTTCTCACAACAAAGCGAACATATTGGAA 111349
|||||| || |||| || | ||||||| | || || ||||||||| || ||||
Sbjct 384673 AATGCGCTTCGATCTCCGAAATAGTTTTCCATTACTAACTACAAAGCGAGTATTTTGGCG 384614
Query 111350 GGGAATTGTCGAAGAACTTCTGTGGTTTATTCGCGGAAGTACAAATGCAAATGAACTTGC 111409
| | | ||||||| | || |||||| ||| || | ||| | || || ||||
Sbjct 384613 TGCTGTCGCCGAAGAATTGCTATGGTTTGTTCATGGTAAAACAGACGCTAAAATACTTCA 384554
Query 111410 AGCAAAAAATGTAAAAATTTGGGATGGAAATGGATCACGTGACTTTCTAGATTCA-GTTG 111468
|| ||||||| | | || ||||| ||||| | | || || |||| | | |
Sbjct 384553 AGAAAAAAATATTCACATATGGGACGGAAACAGTAATAGGGAGTTCTTAGACAAATGCGG 384494
Query 111469 GTCTTGTCGACAACGAAGAAGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACT 111528
|| || | || | || ||||||||||| || |||||||| || ||||| ||||| || |
Sbjct 384493 GTTTTCT-GATAGGGAGGAAGGTGATCTAGGCCCAGTTTATGGTTTTCAGTGGCGTCATT 384435
Query 111529 TTGGTGCAGACTACAAAACCATGCACG-ACTCATATGATTCACAGGGAACTGATCAATTA 111587
|||| || | |||| || | |||| | || || | |||| | |||||| |
Sbjct 384434 TTGGGGCCAAGTACAGAAAC-TGCAAGGACAGTTACAAAGATGAGGGTATAGATCAACTT 384376
Query 111588 CAGAATGTCATTGATCAAATTAAGAACAACCCAACTTCTCGTCGCATTATTATGAGTGCA 111647
||| | || ||||| || | || || |||| | ||| || ||||| ||| |||
Sbjct 384375 CAGCAAGTAATTGACACTATCAGAAATAATCCAAATGATCGACGTATTATAATGTCTGCT 384316
Query 111648 TGGAACCCAAATGCATTGGAAAAAATGGCACTTCCACCATGTCATCTTATGTGC-CAGTT 111706
||||| || | | ||||||| || ||||| |||||| | | ||| || ||
Sbjct 384315 TGGAATCCTGTCGATATCCCTCAAATGGCGCTACCACCTTGTCATTGTCT-TGCACAATT 384257
Query 111707 TTATGTACACGACGGGATGCTTTCATGCCAAATGTATCAGCGATCTGCTGATATTGGTCT 111766
|| ||| | | || | | || || ||| | || || || ||| ||||| || |
Sbjct 384256 TTTTGTTGCCAATGGAGAGTTATCTTGTCAATTATACCAACGCAGTGCCGATATGGGATT 384197
Query 111767 TGGTGTTCCGTTTAATATTGCAAGTTACGCACTACTTACTTGCTTAATCGCTCATTTTAC 111826
||||| || ||||||||||| ||||| | ||||| | | || |||||| ||||
Sbjct 384196 GGGTGTACCATTTAATATTGCCTCGTACGCTTTGCTTACCTATATGATTGCTCATATTAC 384137
Query 111827 AAATCTCAAACCGGGTGAATTCATTCACGTTATCGGAGATGCGCATGTTTACACAAACCA 111886
||||| ||| || || ||| | ||| | | || ||||| ||||| || | || ||
Sbjct 384136 TGATCTCCGACCAGGGGATTTCGTCCACACTTTGGGCGATGCACATGTCTATAATAATCA 384077
Query 111887 CATTGATGCACTTAAAACACAGTTGAAGCGCAAACC 111922
||||| ||| | ||| |||||| | ||| ||||
Sbjct 384076 TATTGAAGCATTAAAAGAACAGTTAACGCGAGAACC 384041
>seq2718
Length=1670031
Score = 102 bits (112), Expect = 2e-16
Identities = 155/214 (72%), Gaps = 9/214 (4%)
Strand=Plus/Plus
Query 22440 TAAGGCAGATTGGGCGCTGAAATGGATGAACAATGAA--CGTTCA--TTCGCGGAACGTC 22495
|||||||||||||||||| ||||| | ||| || || || | ||||||
Sbjct 71116 TAAGGCAGATTGGGCGCTTGCTTGGATTT-CTTCGAAGTCGGCCAACTTTGGTGAACGTG 71174
Query 22496 TTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGG-AGCATTTTG-TGCAATCTT 22553
| ||||||||||||| |||||||| |||||||| ||| || ||||| | | |||||
Sbjct 71175 TAATTGCATTTGCTGCCGTTGAAGGTATTTTCTTCAGTGGCAG--TTTTGCTTCGATCTT 71232
Query 22554 TTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCG 22613
||||| || ||||||| | ||||| || | || ||||| ||||| ||||| ||
Sbjct 71233 CTGGCTTAAGAAACGTGGTTTAATGCCAGGCTTGACATTTTCCAATGAACTAATTTCACG 71292
Query 22614 AGATGAGGGTCTTCATACCGATTTTGCGTGTATG 22647
||||||||| |||||| || || || ||| ||
Sbjct 71293 AGATGAGGGACTTCATTGTGACTTCGCATGTTTG 71326
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303298392385292
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