Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25]
3,306 sequences; 462,505,359 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq3107 122 7e-23
seq1558 105 6e-18
seq603 91.5 1e-13
>seq3107
Length=1323484
Score = 122 bits (134), Expect = 7e-23
Identities = 550/851 (65%), Gaps = 37/851 (4%)
Strand=Plus/Plus
Query 131863 CACGGTGAATTGAATTGTATTCGCAGCAGGCTTAGTTCTTAAATAATACATGCCCGTCTT 131922
||| || ||||| || | ||| ||||| || || || | ||||||||||||||||||||
Sbjct 934423 CACAGTAAATTGTATAGCATTTGCAGCTGGTTTCGTACGCAAATAATACATGCCCGTCTT 934482
Query 131923 CAAGCCTTTCTCCCAA--GAATAATTGTGTATGGACGATAAAATTTTG-TAGCTGGGATT 131979
| ||| || ||| ||| || ||| || || | ||| || ||| |||| |
Sbjct 934483 GAGACCTGCCTTCCAGCCGAAGAAATGTATA--GAAG-TAAGCTTACCATAGTTGGGCTC 934539
Query 131980 GGCCACAAACAGATTGAGCGATTGACTCTGATCGATGTAAGGTCCCCTGTCTGCGGCCAT 132039
||||| | |||| ||| ||||| ||||||||| | | || | ||||| |||||
Sbjct 934540 AGCCACGTGTATGTTGAACGACTGACTTTGATCGATGAATGCACCGCGATCTGCAGCCAT 934599
Query 132040 ATTCAACAATACTTTCTGCTTAATTTCCCAAGCGGTCTTGAAGAG--CGCCTTGACGTCG 132097
|| | || |||| ||| |||||| | || ||| | || ||| | | ||
Sbjct 934600 TTTGATTGATGTTTTCACGGAAATCTCCCAAACAGTTTTGTATAGATCGCGT--ATGTGC 934657
Query 132098 TGTGGAATGTCATCGATATTCTGTACAGATCCGTTGTTTTTGATAATTTTCATCATCAGT 132157
||||| ||| || ||||| |||| || ||| | | ||||| || || |||
Sbjct 934658 TGTGGTATGGATTCAATATTTTGTATGGAGCCGCGACTGGTTATAATATTATTCTTCATA 934717
Query 132158 TCTGTCGAGTACACGTTGCAGTCTACGAGTTTATCG----ACGAGATGTTGATTTACTAT 132213
|| || | ||| | || || | |||| || || || |||||||| |
Sbjct 934718 TCA-TC-ATCCCACAAACCCAACT-CGGTTAGATCGCGCAACAAG-TGATGATTTACAAC 934773
Query 132214 TTGATATTCACCCGATAAGACTCTTCGTACGTACAAATTACTAGTAAACGGCTCGAACGA 132273
|||| ||||||| || | || | ||| || | ||| ||| | || || || ||
Sbjct 934774 TTGAAATTCACCTGAAAGCACACGACGTGTATAAATATTGGAAGTGTATGGTTCAAATGA 934833
Query 132274 TTCGTTGTTTCCCAATATTTGAGCTGTCGTTGCCGTCGGCATGTAGGCAATCAATAATGA 132333
|| ||||| |||| ||||| ||||| | || || |||||| |||| || ||| ||
Sbjct 934834 CTCATTGTTGCCCATAATTTGTGCTGTTGAAGCAGTTGGCATGGGCGCAAGCAGTAAAGA 934893
Query 132334 ATTGCGCAGCCCGTGTATGGCCATTTGCCGTTTAAGCTCGTCCCAGTTCCACAGATCATT 132393
||||| | || ||| |||| | || | ||| ||| ||||| |||||| |
Sbjct 934894 GTTGCGGACACCATGTTGCTTTATTTTCTCCTTCAATTCGGTCCAATTCCAAAGATCAGT 934953
Query 132394 CGATTGAGAGATATTCCACAAATCAAACTGTAAATGACCGCTACTTGCAGGAGATCCGTT 132453
| | | ||| ||||| ||| |||||| | ||| |||| | || || || |
Sbjct 934954 TGGT---GTTTTATCCCACATGTCATACTGTAGAATACCCTTACTAACGGGTGAACCTTC 935010
Query 132454 ATAAGAATCGTATGCTCCGTGTAATTTGGCAAGTTCTATGCT-CTGACT--CAGGGCACC 132510
|||| || || | || || || ||| | ||| || || || || ||| ||
Sbjct 935011 GTAAGTTTCATAGGGGCCAAGTTTTTCGGCTAATTC---GCAACTAGCTTCCAAGGCGCC 935067
Query 132511 ATAATAAATAGTCTCTGAGATTTTTCTATTCAATTCCCTTGCTTGTTGACTGTCGTAGGG 132570
||| ||||| || || | |||| |||||| ||||| || ||| ||||| ||
Sbjct 935068 ATAGTAAATTGTTTCGAATATTTGCTGATTCAAAAGTAATGCTTCTTCACTTTCGTATGG 935127
Query 132571 CAAAT---TTAAAATAGCGAACGCATCGGCAAGTCCCTGAATGCCGATACCGATGGGTCT 132627
|| ||||||| || || || |||| ||||| | || ||||||||||| |
Sbjct 935128 ATAACGCATTAAAATT---AAAGCGTCAGCAAAACCCTGTACTCCAATACCGATGGGACG 935184
Query 132628 ATGTTTAAAATTCGA--TACTTGTGCGCTAGTCAGCGGATAAAAGTTTTTGTCTATTATT 132685
|||| | |||||||| | |||| | | || || |||||| || |||||||||||
Sbjct 935185 ATGTCTGAAATTCGATTTCCTTG-CCTCCGGTAAG-GGATAATGATTAATGTCTATTATT 935242
Query 132686 TTATTGAGATT 132696
||||| | |||
Sbjct 935243 TTATTCAAATT 935253
>seq1558
Length=2163639
Score = 105 bits (116), Expect = 6e-18
Identities = 156/221 (71%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 23979 TAGCCAAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAA 24038
||| | | ||||||||| | || || ||||| |||||||| || | |||||| | ||
Sbjct 2033936 TAGACGAGCAAAATGCAGATTTTCGTCAAAACCTTAACTGGTAAGACCATTACCTTAGAG 2033995
Query 24039 GTCGAGGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATA 24098
|||||| | ||||||||||| | |||||| || || || ||||| |||||
Sbjct 2033996 GTCGAGCCTTCTGACACCATCGAAAATGTCAAAGCTAAAATCCAAGATAAAGAGGGCATC 2034055
Query 24099 CCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTC 24158
|| || ||||||||| | |||| | || ||| |||||| | ||||||| | | | |
Sbjct 2034056 CCCCCAGATCAACAGCGTTTGATCTTCGCCGGAAAGCAATTGGAAGATGGTCGCACCTTG 2034115
Query 24159 AGCGATTATAACATTCAAAAAGAATCTACAATTCATTTAGT 24199
||| || ||||| ||||| || || || | ||||| ||
Sbjct 2034116 TCCGACTACAACATCCAAAAGGAGTCAACCCTCCATTTGGT 2034156
>seq603
Length=780983
Score = 91.5 bits (100), Expect = 1e-13
Identities = 148/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
|||||| | || || || || | ||||| ||| | || ||| | ||||||||| ||
Sbjct 747553 ATGCAAATCTTCGTTAAGACCCTCACTGGCAAAACCATCACCTTGGAAGTCGAGCCCTCA 747612
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
|| ||||| ||| | || || ||||| || ||||||||||| || || ||||||
Sbjct 747613 GATACCATTGAGAATGTTAAGGCTAAGATCCAAGATAAAGAAGGCATTCCACCAGATCAA 747672
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
|| | |||||| | |||||||||||| || |||| | | | ||| || ||
Sbjct 747673 CAACGTTTGATTTTTGCCGGCAAGCAACTTGAGGATGGACGTACTTTGTCCGACTACAAT 747732
Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTA 24203
|| || || ||||| ||| | ||||| ||| ||
Sbjct 747733 ATACAGAAGGAATCGACACTCCATTTGGTGCTA 747765
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429918677072430
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |