Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25]
3,306 sequences; 462,505,359 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq3107 500 1e-136
seq2718 277 2e-69
>seq3107
Length=1323484
Score = 500 bits (554), Expect = 1e-136
Identities = 1240/1861 (67%), Gaps = 52/1861 (3%)
Strand=Plus/Plus
Query 61871 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAA 61930
|| ||||||||||| | ||| ||||| ||||| || ||||| |||| ||| | |||
Sbjct 934448 GCTGGTTTCGTACGCAAATAATACATGCCCGTCTTGAGACCTGCCTTCCAGCCGAAGAAA 934507
Query 61931 TGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTT 61990
|| ||| || || || ||| | || || || | || || || | || ||||||
Sbjct 934508 TGTATAGAAGTAAGCTTACCATAGTTGGGCTCAGCCACGTGTATGTTGAACGACTGACTT 934567
Query 61991 TGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATAATCGTCTTTTGTGGAATTTCC 62050
||||||||||| || || | |||||||||||||| || || || | ||| |||
Sbjct 934568 TGATCGATGAATGCACCGCGATCTGCAGCCATTTTGATTGATGTTTTCACGGAAATCTCC 934627
Query 62051 CAAATAGTTTTATAAAC-TCGCTTAATATCTTCTGGAA-GGTTTG--TATTCTGAATGGA 62106
|||| |||||| || | |||| || | | | ||| | || || |||| || |||||
Sbjct 934628 CAAACAGTTTTGTATAGATCGCGTA-TGTGCTGTGGTATGGATTCAATATTTTGTATGGA 934686
Query 62107 TCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAA 62166
|| | | | ||||| ||||||| || ||||||| ||| || ||||||||
Sbjct 934687 GCCGCGACTGGTTATAATATTATTCTTCATATCATCATCCCACAAACCCAACTCGGTTAG 934746
Query 62167 AACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTA 62226
| | | | | || |||| || ||||||||||| || || | || | || || ||
Sbjct 934747 ATCGCGCAACAAGTGATGATTTACAACTTGAAATTCACCTGAAAGCACACGACGTGTATA 934806
Query 62227 AATATTACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGC 62286
|||||| || || ||||| | |||||||| || |||| |||||| || ||||| ||
Sbjct 934807 AATATTGGAAGTGTATGGTTCAAATGACTCATTGTTGCCCATAATTTGTGCTGTTGAAGC 934866
Query 62287 AGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTT--CTGATTTTATCT 62344
||| ||||| || || | || |||| || | | ||| ||||| | ||||| ||
Sbjct 934867 AGTTGGCATGGGCGCAAGCAGTAAAGAGTTGCGGACACC--ATGTTGCTTTATTTTCTCC 934924
Query 62345 TTTA--GAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTA 62402
|| | ||| ||||||||||||||| | ||| ||||
Sbjct 934925 TTCAATTCGGT--CCAATTCCAAAGATCAGTTGGTGTTTTATCCCACATGTCATACTGTA 934982
Query 62403 GAATACCGTTACTGGCGTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTA 62462
||||||| ||||| || || ||| | || || || || || || || || ||||
Sbjct 934983 GAATACCCTTACTAACGGGTGAACCTTCGTAAGTTTCATAGGGGCCAAGTTTTTCGGCTA 935042
Query 62463 GTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGAT 62522
||| ||||| || || || || || || ||||| |||||||| || | || ||| | |
Sbjct 935043 ATTCGCAACTAGCTTCCAAGGCGCCATAGTAAATTGTTTCGAATATTTGCTGATTCAAAA 935102
Query 62523 CTTGCGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTT 62582
| ||||| || || |||||||| | | ||| || ||||| || || || |
Sbjct 935103 GTAATGCTTCTTCACTTTCGTATGGATAACGCATTAAAATTAAAGCGTCAGCAAAACCCT 935162
Query 62583 GAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTC--AGCTTCTGGAATAGG 62640
| || ||||||||||| || | |||||| ||| |||||| || || || | ||
Sbjct 935163 GTACTCCAATACCGATGGGACGATGTCTGAAATT--CGATTTCCTTGCCTCCGGTAAGGG 935220
Query 62641 ATAATAATTAATATCTATAATTTTATTGAGATTTCTGACAATTACTTTGACCACATCCTT 62700
||||| |||||| ||||| |||||||| | ||| | || |||| || ||
Sbjct 935221 ATAATGATTAATGTCTATTATTTTATTCAAATTACGTGTAACGGTTTTGGTGACCTC--- 935277
Query 62701 CAGTTTGAGAAAATCAAA-TCGCCCATCTATT--------ACAAACATGTTCAATGCAAC 62751
|||||| | ||| ||| | | | || |||||||| ||||| || |
Sbjct 935278 ---TTTGAGGCGCTTAAAGTCGTACGTTTTTTCGGGTGTGACAAACATATTCAACGCGAT 935334
Query 62752 AGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCA 62811
|| |||| || || || |||||||||| || | | ||||| | || || || ||
Sbjct 935335 TGAAGCCAAGTTGCACACAGCTACCTCATCAGGTGCTGAATATTCCACAATTTCGGTACA 935394
Query 62812 AAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATC 62871
| |||||||||||| || || || | ||| ||||||||||||||| ||||| |||||
Sbjct 935395 TAAATTACTACACTTAATTGTACCAACATTCTGTTGATTACTCTTTCGATTACAAGCATC 935454
Query 62872 CTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGAC 62931
||||| | ||| |||| || || || || | || ||||| ||||| ||| | |
Sbjct 935455 TTTATACAACATGTATGGTGTGCCGGTCTCCACTTGCGATTCAATAAT-GCTAAACCAAA 935513
Query 62932 GAC-TCGAGCCTTTA-TTATAGATTTGTATCTCTTTTCTCTTTCGTATAGTGTATACAAT 62989
||| | | || |||| || ||| | | || || || ||| ||| ||| |||
Sbjct 935514 GACTTTGTGCTTTTACTTTCTTATTAGCACGTCCTTCCT-GTTCATATTTCAGATATAAT 935572
Query 62990 CGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAAC 63049
||||||||| || ||||| || | | || || ||||| | | |||||||| | |
Sbjct 935573 TTTTCGAACTCTTCACCCCATACTTCATGTAGACCGGGACACTTGTGTGGACACATTAGC 935632
Query 63050 GACCACTCTCCGTCAT--CCTTC-ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCT 63106
||||| ||| |||| |||| || ||||||||||| |||||||| ||||| | |||
Sbjct 935633 GACCAGTCT---TCATTGGCTTCTACACGTTTCATAAATAGATCAGGTATCCACAAAGCA 935689
Query 63107 ATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAAC 63166
||| | |||||||| | ||| || || || || || || || || | ||| | ||
Sbjct 935690 TAAAACAAATCTCTGGCGCGATGCTCTTCTTTCCCAGTGTTTTTCTTCAAATCCAAAAAT 935749
Query 63167 GCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTT 63226
| |||||||| |||||| ||||||| ||| ||||| | | || || |||||
Sbjct 935750 TGGAAAATATCAGCATGCCATGGTTCCAGGTAGATGGCAAATGCGCCTGGACGTTTACCG 935809
Query 63227 CCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCA 63286
|| || ||||| | || | || ||||| | |||| |||||| || | | |||
Sbjct 935810 CCACCTTGATCCACATAGCGTGCTACATTATTGAACACTCGCAACATAGGCACCAAACCG 935869
Query 63287 TTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAAT---AT-TACTAAT 63342
|| ||||| ||||| || || | || | || | ||||| || || ||| |
Sbjct 935870 TTTGATGTGCCATTTGTACCCGCAATTGCAGTGCCTTTTGCACGTATGCAATGTAC--GT 935927
Query 63343 TGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACG-TATCAT 63401
| ||||| || ||||| || ||| || || ||||| ||| | | | || | | |
Sbjct 935928 T--CAGACCAATACCCCCAGCAGATTTGGAAATCAATGCACATTGATGTGCCGATGTGA- 935984
Query 63402 AGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGAC 63461
| || || || || ||| |||| |||| | |||||||| || |||| ||| |
Sbjct 935985 AAATCCCATCAATGGAATCGTCCACCATGGTCAGTAGAAAGCATGATGACAATTGCGGCT 936044
Query 63462 GACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTA 63521
| | || | ||| |||| || |||||||| || ||||| | ||| ||||| |
Sbjct 936045 GCTTGGTGGCAGCAGCGAATAGCGTTGGAGAAGCATGCGTAAAATAACGTTCGGAAAGCA 936104
Query 63522 GATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCA 63581
||||| || || || |||| ||||| || ||| || || | || |||||||
Sbjct 936105 AGTTGTATGTTTCGATTGCTGCATCTATGTCTTCGCCATGTATACCGATGGCAACACGCA 936164
Query 63582 TTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTT 63641
||||||| ||||| |||| ||||| || ||| |||| ||| | ||| ||||| ||
Sbjct 936165 TTAACATATGCTGTGGTCGCTCAACAATTTTGCCATTTAATTTTAGCAAATAGGAACGTT 936224
Query 63642 CCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGT 63701
| | |||||||||||||||||| || || ||| || || || |||||||| | ||||
Sbjct 936225 CAAGAGTTTTAAAACCAAAATAATTATAACCAAAATCGCGGTCATAAATAATGGCAGAGT 936284
Query 63702 T 63702
|
Sbjct 936285 T 936285
>seq2718
Length=1670031
Score = 277 bits (306), Expect = 2e-69
Identities = 491/712 (69%), Gaps = 7/712 (1%)
Strand=Plus/Minus
Query 32486 AATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTAT 32545
|| ||| | ||| || |||||||| ||||| ||| | || |||||||| || ||
Sbjct 71497 AAGCAAACGATCAGCCACAAATTCGATATAATCGGACATTAGTTTGCAATTCATACCGAT 71438
Query 32546 AAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTAT 32605
|| || || || | ||| |||| | ||||| || ||||| || || || | ||
Sbjct 71437 TAGATTCACCGGCAAAGCGTCAGTTAAGAATTCCTGCTCAATTTTAACAGCTTCAGAAAT 71378
Query 32606 AATAG--ATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACAT 32663
|| | ||| | | | ||| ||| | | |||||||| ||||||||||||
Sbjct 71377 TATTTCAACAATACGCT--CATTACTTGGTTTTTGTATTAAATGTTGGAACATCAAACAT 71320
Query 32664 GCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCG 32723
||||| || || || || ||||| |||| ||||| ||| |||||||| || | ||
Sbjct 71319 GCGAAGTCACAATGAAGTCCCTCATCTCGTGAAATTAGTTCATTGGAAAATGTCAAGCCT 71260
Query 32724 GGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATT 32783
||||||| ||||| || |||||||| || || || ||||| ||| ||||||||
Sbjct 71259 GGCATTAAACCACGTTTCTTAAGCCAGAAGATCGAAGCAAAACTGCCACTGAAGAAAATA 71200
Query 32784 CCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCG--CTGTCATGTA-TC 32840
||||| || || ||||| ||||| | | || ||| | ||| || | | | ||
Sbjct 71199 CCTTCAACGGCAGCAAATGCAATTACACGTTCACCAAAGTTGGCCGACTTCGAAGAAATC 71140
Query 32841 CACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAG 32900
|| | |||||||| ||||| ||||| ||||||||||||||||||||| ||
Sbjct 71139 CAAGCAAGCGCCCAATCTGCCTTACGCTTTACGGCAGGCATTGTCTCTATAGCATTGAAT 71080
Query 32901 AGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCC 32960
| | || ||| || || |||| |||||||||||| || | |||||||||||
Sbjct 71079 AAGCAATTCCTTTGTTTCGAGTCCTTAATATATGTATCAATTAATATGCTATACATTTCA 71020
Query 32961 GAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGT 33020
||||| | || || || || ||||||||||| |||||||| | ||||| || | ||
Sbjct 71019 GAATGCACATTCTCCATCGCAATTTGAAATCCATAGAAGCAACGTGCCTCTGTCACTTGG 70960
Query 33021 ACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAA 33080
||||| || || ||||| ||| |||||||||||| || || ||| || || |||
Sbjct 70959 ACTTCCTGGCAGAAGCGTTCAACTACATTTTCATTCACAATACCATCAGATGCGGCGAAA 70900
Query 33081 AACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTG 33140
|| || || || || ||||||| | ||| | || || ||||||||
Sbjct 70899 AAGGCTAACACGTGGGAAATAAAATGTCGTTCATTATCAGTGAGGCGTGCCCAATCATCC 70840
Query 33141 ATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCT 33192
||||||||||| | ||| ||||| || |||||||| || ||||| |||||||
Sbjct 70839 ATATCTTTAGAAAGATCTACTTCCTCTACTGTCCAGAACGATGCTTCTGCCT 70788
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633605815157600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |