Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25] 3,306 sequences; 462,505,359 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq603 98.7 7e-16 >seq603 Length=780983 Score = 98.7 bits (108), Expect = 7e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| || |||| || | || ||||||||||| ||| ||||| || || || Sbjct 747553 ATGCAAATCTTCGTTAAGACCCTCACTGGCAAAACCATCACCTTGGAAGTCGAGCCCTCA 747612 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | || ||||| || || |||||||| || | || | | ||| Sbjct 747613 GATACCATTGAGAATGTTAAGGCTAAGATCCAAGATAAAGAAGGCATTCCACCAGATCAA 747672 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 || | | || ||||| ||||| ||||| || ||| | ||| || |||| |||||| Sbjct 747673 CAACGTTTGATTTTTGCCGGCAAGCAACTTGAGGATGGACGTACTTTGTCCGACTACAAT 747732 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 || ||||||||||| || || ||| |||| ||||| | || ||||| Sbjct 747733 ATACAGAAGGAATCGACACTCCATTTGGTGCTACGTCTTCGCGGAGG 747779 Score = 87.8 bits (96), Expect = 1e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 21830 CAAAATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGC 21889 |||||||||||| || | || || || || ||||| ||||| || |||| ||| | Sbjct 745566 CAAAATGCAAATCTTCGTGAAGACCTTGACTGGCAAGACCATCACTCTGGAGGTTGAACC 745625 Query 21890 CGCAGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAA 21949 | || || | | || |||| || ||| || ||||| || | || | | Sbjct 745626 ATCCGATACTATTGAAAATGTTAAAGCTAAGATTCAAGACAAAGAAGGAATCCCCCCAGA 745685 Query 21950 CCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTA 22009 ||||| | | |||||||| || |||||||| ||||| | ||| || ||||||| Sbjct 745686 TCAACAACGTTTAATCTTTGCCGGTAAACAACTGGAAGACGGACGCACTCTGTCCGATTA 745745 Query 22010 CAATATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 ||| || |||||||| ||||| |||||| |||| | ||| |||| || || Sbjct 745746 CAACATCCAGAAGGAGTCTACACTTCATTTGGTTCTTCGTCTACGTGGTGG 745796 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358110370480324