Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25] 3,306 sequences; 462,505,359 total letters Query= NC_008953.1 Length=3935 Score E Sequences producing significant alignments: (Bits) Value seq558 86.0 2e-13 >seq558 Length=2810590 Score = 86.0 bits (94), Expect = 2e-13 Identities = 107/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 3334 CCCATGAAGCGAGTCTTTCCAACAATCACTCGATGTACTTTTCACAAATACGGTCCTTCG 3393 || ||| ||| |||||||| | | |||| |||||| || |||||||| ||||| || Sbjct 2799221 CCGATGGCGCGTGTCTTTCCGAAAGTCACCAAATGTACATTCCACAAATATGGTCCATCT 2799280 Query 3394 GGCTCCCTGGAAAACTACGAGGGACTCTGCATCCTCCCGGAGAACGTGGTCAACGAGAAG 3453 || || || |||| | ||| || ||||| | | || ||| | ||||| ||||| Sbjct 2799281 GGTTCGGTGCAAAAGTTCGACGGTCTCTGTGTGTTGCCACTGAATATTGTCAATGAGAAA 2799340 Query 3454 ATCTACATTTTCCTCTGGTTCTGGTTC 3480 ||||| | ||||| |||||||||||| Sbjct 2799341 ATCTATGTATTCCTGTGGTTCTGGTTC 2799367 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 12479548731000