Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25] 3,306 sequences; 462,505,359 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq2851 104 5e-17 >seq2851 Length=1548428 Score = 104 bits (114), Expect = 5e-17 Identities = 220/324 (68%), Gaps = 16/324 (5%) Strand=Plus/Minus Query 68495 TGCAAAGTTGTACGCTTATTGGATCTGTAAAAATTACCGTGAGTCGTATAACATGTATGT 68554 ||| ||| |||||| | |||||| || || |||||||| | ||||| ||||||| Sbjct 769484 TGCCAAGATGTACGGCTTTTGGATTGTTATTAACTACCGTGAAGCATATAATATGTATGC 769425 Query 68555 ATGCAACTCGATTTGTTTCAATCACGAGAGTCCCAACA--GAGGCCATCAGTTCGTGACT 68612 || || || | ||||||||||| |||| || |||| | | |||||||| Sbjct 769424 CTGTAATGGCATATTGTTCAATCACGAA--TCCCCACGTCGAGGTGAAAATTTCGTGACA 769367 Query 68613 CGTAAAATCACGAAGGTGGTCGCGAATAT-TTTCAATGGTGTCGAAAAATGCATG-TATC 68670 || ||||| ||| ||| ||||| || ||||| || | || || || | || Sbjct 769366 CGCAAAATAACGCGTTCGGTAGCGAAAATATTTCA------TCAACAATTGGATTCTTTC 769313 Query 68671 ----TCGGTAATATAGATGCCAAAAGAGATTGGGGATATGCGAAGGATTACGTAGAAGCA 68726 | |||||| | || | ||| | |||||||| | || | ||||||||| || || Sbjct 769312 GAATTGGGTAATCTCGACTCGAAACGTGATTGGGGTCACGCAATGGATTACGTGGAGGCC 769253 Query 68727 ATGTGGTTGATGCTGCAACAAGATACTCCGGATGACTATGTGATTGCAACAGGGAAAACA 68786 |||||| ||||| ||||| || | || | ||| | ||||||||| || || |||| Sbjct 769252 ATGTGGATGATGTTGCAATTGGAAAGACCTGCTGATTTTGTGATTGCCACCGGTGAAACG 769193 Query 68787 ACGAGCGTTCGTGAGTTCGTGAAA 68810 ||||||||||| || ||| || Sbjct 769192 CACAGCGTTCGTGAATTTGTGGAA 769169 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102833284071100