Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25]
3,306 sequences; 462,505,359 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq2851 104 5e-17
>seq2851
Length=1548428
Score = 104 bits (114), Expect = 5e-17
Identities = 220/324 (68%), Gaps = 16/324 (5%)
Strand=Plus/Minus
Query 68495 TGCAAAGTTGTACGCTTATTGGATCTGTAAAAATTACCGTGAGTCGTATAACATGTATGT 68554
||| ||| |||||| | |||||| || || |||||||| | ||||| |||||||
Sbjct 769484 TGCCAAGATGTACGGCTTTTGGATTGTTATTAACTACCGTGAAGCATATAATATGTATGC 769425
Query 68555 ATGCAACTCGATTTGTTTCAATCACGAGAGTCCCAACA--GAGGCCATCAGTTCGTGACT 68612
|| || || | ||||||||||| |||| || |||| | | ||||||||
Sbjct 769424 CTGTAATGGCATATTGTTCAATCACGAA--TCCCCACGTCGAGGTGAAAATTTCGTGACA 769367
Query 68613 CGTAAAATCACGAAGGTGGTCGCGAATAT-TTTCAATGGTGTCGAAAAATGCATG-TATC 68670
|| ||||| ||| ||| ||||| || ||||| || | || || || | ||
Sbjct 769366 CGCAAAATAACGCGTTCGGTAGCGAAAATATTTCA------TCAACAATTGGATTCTTTC 769313
Query 68671 ----TCGGTAATATAGATGCCAAAAGAGATTGGGGATATGCGAAGGATTACGTAGAAGCA 68726
| |||||| | || | ||| | |||||||| | || | ||||||||| || ||
Sbjct 769312 GAATTGGGTAATCTCGACTCGAAACGTGATTGGGGTCACGCAATGGATTACGTGGAGGCC 769253
Query 68727 ATGTGGTTGATGCTGCAACAAGATACTCCGGATGACTATGTGATTGCAACAGGGAAAACA 68786
|||||| ||||| ||||| || | || | ||| | ||||||||| || || ||||
Sbjct 769252 ATGTGGATGATGTTGCAATTGGAAAGACCTGCTGATTTTGTGATTGCCACCGGTGAAACG 769193
Query 68787 ACGAGCGTTCGTGAGTTCGTGAAA 68810
||||||||||| || ||| ||
Sbjct 769192 CACAGCGTTCGTGAATTTGTGGAA 769169
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102833284071100
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |