Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25] 3,306 sequences; 462,505,359 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq3085 84.2 2e-11 >seq3085 Length=1382921 Score = 84.2 bits (92), Expect = 2e-11 Identities = 100/135 (74%), Gaps = 8/135 (6%) Strand=Plus/Minus Query 118179 CCGTCGCGACCGGCCCTTCCTATCTCTTGATAATAACCGTCCAGTGATTTGGGCATACTG 118238 || || ||||| || | ||| ||||||||||||||| || | |||||| |||| | Sbjct 1016970 CCATCACGACCCGCTCGTCCAGCCTCTTGATAATAACCTTCAATTGATTTTGGCA----G 1016915 Query 118239 TG----ATGTATCACCAACCGCACGTCGGGTTTATCGATGCCCATCCCGAACGCTATCGT 118294 || ||| | ||| || || || || || |||||||| ||||| || || |||||||| Sbjct 1016914 TGAAAAATGCAGCACAAAACGAACATCTGGCTTATCGATACCCATGCCAAATGCTATCGT 1016855 Query 118295 CGAACATATCACTCG 118309 || |||||| || || Sbjct 1016854 CGCACATATGACGCG 1016840 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381757417658064