Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25]
3,306 sequences; 462,505,359 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq1113 104 3e-17
>seq1113
Length=4665328
Score = 104 bits (114), Expect = 3e-17
Identities = 244/363 (67%), Gaps = 8/363 (2%)
Strand=Plus/Minus
Query 175746 AACCTGTGCCAATACCTTCGGTGCCGTTCACGAGAACCATTGGAAGCGTTGGCATATAGA 175805
|||||||||||||||| || | || ||||| | ||||||||| | |||| |||||
Sbjct 2123181 AACCTGTGCCAATACCATCAGCACCATTCACCAAAACCATTGGTATAATTGGTATATACC 2123122
Query 175806 AGTCTGGTTCAATCGCACGCCCATCATCGTCCAAATAGTTGAGCACGGGGTCATCCCTCG 175865
| | |||||||||| | |||||||| | || | | || || ||||| |
Sbjct 2123121 ATTGTGGTTCAATCTTTTGACCATCATCAACTTCGTACGTCAACAATGGATCATCGGCTG 2123062
Query 175866 GATCAAAGATTTTACGAGCATCCTTGGTGAGTTTT--GTGAAGATGTACCT--CGTTTGA 175921
| | || || || | || ||||| || ||||| || || | || | |
Sbjct 2123061 GGTGGAATATGAGTCGCG--TCAAGGGTGACATTAAGGTGAAAATATAACGAGCGCTCGC 2123004
Query 175922 GACGCATCTTTGCCACCCATGAGACGCGTCCCAAATTGACCACATGGCTCAAGGAGATTG 175981
|| |||||| |||||| ||||| || || |||||||||| ||||| | | |||
Sbjct 2123003 -ACA-ATCTTTACCACCCTGCAGACGTGTACCGAATTGACCACGAGGCTCCAATAAATTA 2122946
Query 175982 ATATTGTTTGAGCCCATATAGTCATTCGCCAACTTGACAATCGTATCCGCGAGGGAGACT 176041
||||| ||||| || | || | | |||||| ||||| || ||| || | || |
Sbjct 2122945 ATATTATTTGATCCTACGTAATTTTGCGCCAAATTGACTATGGTAGCCTGCAATGACATC 2122886
Query 176042 TCACCGTGATGGTAGGCCGACTTGTCCGCCACATACGCCGCCAACTGCGCCACCTTCATC 176101
||||||||||||||||| ||| | || ||||| | | | ||| || || || |||| |
Sbjct 2122885 TCACCGTGATGGTAGGCGGACATTTCAGCCACTGAACCAGACAATTGGGCAACTTTCACC 2122826
Query 176102 TCA 176104
|||
Sbjct 2122825 TCA 2122823
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613481846814960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |