Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25] 3,306 sequences; 462,505,359 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq3107 122 1e-22 >seq3107 Length=1323484 Score = 122 bits (134), Expect = 1e-22 Identities = 322/489 (66%), Gaps = 2/489 (0%) Strand=Plus/Plus Query 203840 TTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGCCG 203899 || ||||| || || || || || || | || || | | | || ||| |||||||| Sbjct 934418 TTATCCACAGTAAATTGTATAGCATTTGCAGCTGGTTTCGTACGCAAATAATACATGCCC 934477 Query 203900 GTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGG 203959 ||||| || || || ||| ||| | | || || |||| || || | |||||| Sbjct 934478 GTCTTGAGACCTGCCTTCCAGCCGAAGAAATGTATAGAAGTAAGCTTACCATAGTTGGGC 934537 Query 203960 TCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGGCC 204019 || |||| ||| ||||| | ||||| ||||| |||||||| | | |||||||| ||| Sbjct 934538 TCAGCCACGTGTATGTTGAACGACTGACTTTGATCGATGAATGCACCGCGATCTGCAGCC 934597 Query 204020 ATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGTGTGT 204079 || ||||| || ||| ||||||||||| || || ||| | | || | |||| Sbjct 934598 ATTTTGATTGATGTTTTCACGGAAATCTCCCAAACAGTTTTGTATAGATCGCGTATGTGC 934657 Query 204080 TGAGGCACATCTTCCCACGTCCTG-ATCGAGCCGTTGTCGGCCATCAGTCTCATCCTCGT 204138 || || | || | | | || || |||||| || || | | || || | Sbjct 934658 TGTGGTATGGATT-CAATATTTTGTATGGAGCCGCGACTGGTTATAATATTATTCTTCAT 934716 Query 204139 CTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGATCTG 204198 || || |||||| |||||| | | || || |||| || ||| | || | | || Sbjct 934717 ATCATCATCCCACAAACCCAACTCGGTTAGATCGCGCAACAAGTGATGATTTACAACTTG 934776 Query 204199 AAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGCCTC 204258 ||| || || || ||||| | || || | | ||| ||| ||||||| || | ||| Sbjct 934777 AAATTCACCTGAAAGCACACGACGTGTATAAATATTGGAAGTGTATGGTTCAAATGACTC 934836 Query 204259 GTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGAGTT 204318 |||||||| | ||| || || || || || |||||||| || || || | ||||| Sbjct 934837 ATTGTTGCCCATAATTTGTGCTGTTGAAGCAGTTGGCATGGGCGCAAGCAGTAAAGAGTT 934896 Query 204319 GCGCACACC 204327 ||| ||||| Sbjct 934897 GCGGACACC 934905 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795122340211360