Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25]
3,306 sequences; 462,505,359 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq3107 122 1e-22
>seq3107
Length=1323484
Score = 122 bits (134), Expect = 1e-22
Identities = 322/489 (66%), Gaps = 2/489 (0%)
Strand=Plus/Plus
Query 203840 TTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGCCG 203899
|| ||||| || || || || || || | || || | | | || ||| ||||||||
Sbjct 934418 TTATCCACAGTAAATTGTATAGCATTTGCAGCTGGTTTCGTACGCAAATAATACATGCCC 934477
Query 203900 GTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGG 203959
||||| || || || ||| ||| | | || || |||| || || | ||||||
Sbjct 934478 GTCTTGAGACCTGCCTTCCAGCCGAAGAAATGTATAGAAGTAAGCTTACCATAGTTGGGC 934537
Query 203960 TCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGGCC 204019
|| |||| ||| ||||| | ||||| ||||| |||||||| | | |||||||| |||
Sbjct 934538 TCAGCCACGTGTATGTTGAACGACTGACTTTGATCGATGAATGCACCGCGATCTGCAGCC 934597
Query 204020 ATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGTGTGT 204079
|| ||||| || ||| ||||||||||| || || ||| | | || | ||||
Sbjct 934598 ATTTTGATTGATGTTTTCACGGAAATCTCCCAAACAGTTTTGTATAGATCGCGTATGTGC 934657
Query 204080 TGAGGCACATCTTCCCACGTCCTG-ATCGAGCCGTTGTCGGCCATCAGTCTCATCCTCGT 204138
|| || | || | | | || || |||||| || || | | || || |
Sbjct 934658 TGTGGTATGGATT-CAATATTTTGTATGGAGCCGCGACTGGTTATAATATTATTCTTCAT 934716
Query 204139 CTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGATCTG 204198
|| || |||||| |||||| | | || || |||| || ||| | || | | ||
Sbjct 934717 ATCATCATCCCACAAACCCAACTCGGTTAGATCGCGCAACAAGTGATGATTTACAACTTG 934776
Query 204199 AAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGCCTC 204258
||| || || || ||||| | || || | | ||| ||| ||||||| || | |||
Sbjct 934777 AAATTCACCTGAAAGCACACGACGTGTATAAATATTGGAAGTGTATGGTTCAAATGACTC 934836
Query 204259 GTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGAGTT 204318
|||||||| | ||| || || || || || |||||||| || || || | |||||
Sbjct 934837 ATTGTTGCCCATAATTTGTGCTGTTGAAGCAGTTGGCATGGGCGCAAGCAGTAAAGAGTT 934896
Query 204319 GCGCACACC 204327
||| |||||
Sbjct 934897 GCGGACACC 934905
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795122340211360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |