Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25]
3,306 sequences; 462,505,359 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq1558 123 6e-23
seq2605 107 5e-18
>seq1558
Length=2163639
Score = 123 bits (136), Expect = 6e-23
Identities = 166/228 (73%), Gaps = 5/228 (2%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
||||| | ||| || | ||||| || ||||||||||||| ||||||||| | ||| ||
Sbjct 2034168 CGAAGACGCAGAACCAAATGGAGGGTTGACTCCTTTTGGATGTTGTAGTCGGACAAGGTG 2034109
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| |||||||||| ||||||||||||||||| | |||||| || || || || ||
Sbjct 2034108 CGACCATCTTCCAATTGCTTTCCGGCGAAGATCAAACGCTGTTGATCTGGGGGGATGCCC 2034049
Query 199529 TCTCGCTCCTGAATCTTTTGC-TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAA 199587
||| || || || ||| || || || ||||| |||||| | | || || || ||
Sbjct 2034048 TCTTTATCTTGGAT-TTTAGCTTTGACATTTTCGATGGTGTCAGAAGGCTCGACCTCTAA 2033990
Query 199588 CGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTT 199635
|| || |||||||| || | ||||| || ||||| || ||||||
Sbjct 2033989 GGTAATGGTCTTACCAGTTAAGGTTTTGACGAAAATCTG---CATTTT 2033945
>seq2605
Length=276952
Score = 107 bits (118), Expect = 5e-18
Identities = 140/194 (72%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 199433 GTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCG 199492
|| ||||| || || | || ||||||||||| || | |||||||||| |||||||||
Sbjct 242093 GTAGACTCTTTCTGAATATTATAGTCAGCCAATGTGCGACCATCTTCCAATTGCTTTCCG 242034
Query 199493 GCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTC 199552
|| || || |||||||| || || || ||||||||| || ||||| || |||
Sbjct 242033 GCAAAAATTAGACGCTGTTGATCAGGGGGAATTCCTTCCTTATCTTGAATTTTGGCCTTA 241974
Query 199553 ACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTT 199612
|| ||| | || || | | || || || | ||||| ||||||||||| || |||
Sbjct 241973 ACATGTTCAATAGTATCCGAAGGCTCAACCTCAAGAGTGATGGTCTTACCCGTAAGGGTT 241914
Query 199613 TTCACAAAAATTTG 199626
|| || ||||||||
Sbjct 241913 TTTACGAAAATTTG 241900
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178871663091502
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |