Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25]
3,306 sequences; 462,505,359 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq3107 96.9 4e-15
>seq3107
Length=1323484
Score = 96.9 bits (106), Expect = 4e-15
Identities = 440/689 (64%), Gaps = 13/689 (2%)
Strand=Plus/Minus
Query 112305 GAGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAG 112364
||||| || |||||||| ||| | || ||||| || ||||| | ||||||||||||| ||
Sbjct 935484 GAGACCGGCACACCATACATGTTGTATAAAGATGCTTGTAATCGAAAGAGTAATCAACAG 935425
Query 112365 AATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAA 112424
||| | ||| || ||| || || | ||||| ||||| |||||| | |||
Sbjct 935424 AATGTTGGTACAATTAAGTGTAGTAATTTATGTACCGAAATTGTGGAATATTCAGCACCT 935365
Query 112425 GATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAG 112484
|||||| |||||||| ||| | || |||||||| | | || ||| || ||
Sbjct 935364 GATGAGGTAGCTGTGTGCAACTTGGCTTCAATCGCGTTGAATATGTTTGTCACACCCGA- 935306
Query 112485 ACAAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTA 112544
||| || | || | | | ||| | || || || ||||| || ||| || |
Sbjct 935305 --AAAAACGTACGACTTTAAGCGCCTCAAAGAGGTCACCAAAACCGTTACACGTAATTTG 935248
Query 112545 AACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGA 112604
|| | | | || || | ||| ||| ||| | | || | ||||| ||| | |||
Sbjct 935247 AATAAAATAATAGACATTAATCATTATCCCTTACCGGAGGCAAGGAAATCGAATTTCAGA 935188
Query 112605 CACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCAC 112664
|| ||||| || ||| | || || || ||| | || || | || ||| | || |
Sbjct 935187 CATCGTCCCATCGGTATTGGAGTACAGGGTTTTGCTGACGCTTTAATTTTAATGCGTTAT 935128
Query 112665 GCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCAC 112724
||| || || ||||| | ||| || ||||| || ||||| || |
Sbjct 935127 CCATACGAAAGTGAAGAAGCATTACTTTTGAATCAGCAAATATTCGAAACAATTTACTAT 935068
Query 112725 GCCGCTCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAG 112784
| ||| | || || |||| || || || || ||| || |||||||| | ||
Sbjct 935067 GGCGCCTTGGAAGCTAGTTGCGAATTAGCCGAAAAACTTGGCCCCTATGAAACTTACGAA 935008
Query 112785 GGTTCTCCAGCTTCACAAGGG-GTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCT 112843
||||| || | || ||||| | || || | ||| ||||||| | | ||||| ||
Sbjct 935007 GGTTCACCCG-TTAGTAAGGGTATTCTACAGTATGACATGTGGG-ATAAAACACCAA-CT 934951
Query 112844 --TCACTACGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGT 112901
|| | | ||| || | ||||| || ||| | | ||| | || ||| |
Sbjct 934950 GATCTTTGGAATTGGACCGAATTGAAGGAGAAAATAAAGCAACATGGTGTCCGCAAC--T 934893
Query 112902 CTTT--TGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAAT 112959
|||| || | || || |||||||| || || || |||||||| |||| || ||||| |
Sbjct 934892 CTTTACTGCTTGCGCCCATGCCAACTGCTTCAACAGCACAAATTATGGGCAACAATGAGT 934833
Query 112960 GCTTTGAACCCTACACGACGAACATCTAT 112988
|||||||| ||||| | || || |||
Sbjct 934832 CATTTGAACCATACACTTCCAATATTTAT 934804
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620716747820320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |