Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25] 3,306 sequences; 462,505,359 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq3107 96.9 4e-15 >seq3107 Length=1323484 Score = 96.9 bits (106), Expect = 4e-15 Identities = 440/689 (64%), Gaps = 13/689 (2%) Strand=Plus/Minus Query 112305 GAGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAG 112364 ||||| || |||||||| ||| | || ||||| || ||||| | ||||||||||||| || Sbjct 935484 GAGACCGGCACACCATACATGTTGTATAAAGATGCTTGTAATCGAAAGAGTAATCAACAG 935425 Query 112365 AATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAA 112424 ||| | ||| || ||| || || | ||||| ||||| |||||| | ||| Sbjct 935424 AATGTTGGTACAATTAAGTGTAGTAATTTATGTACCGAAATTGTGGAATATTCAGCACCT 935365 Query 112425 GATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAG 112484 |||||| |||||||| ||| | || |||||||| | | || ||| || || Sbjct 935364 GATGAGGTAGCTGTGTGCAACTTGGCTTCAATCGCGTTGAATATGTTTGTCACACCCGA- 935306 Query 112485 ACAAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTA 112544 ||| || | || | | | ||| | || || || ||||| || ||| || | Sbjct 935305 --AAAAACGTACGACTTTAAGCGCCTCAAAGAGGTCACCAAAACCGTTACACGTAATTTG 935248 Query 112545 AACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGA 112604 || | | | || || | ||| ||| ||| | | || | ||||| ||| | ||| Sbjct 935247 AATAAAATAATAGACATTAATCATTATCCCTTACCGGAGGCAAGGAAATCGAATTTCAGA 935188 Query 112605 CACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCAC 112664 || ||||| || ||| | || || || ||| | || || | || ||| | || | Sbjct 935187 CATCGTCCCATCGGTATTGGAGTACAGGGTTTTGCTGACGCTTTAATTTTAATGCGTTAT 935128 Query 112665 GCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCAC 112724 ||| || || ||||| | ||| || ||||| || ||||| || | Sbjct 935127 CCATACGAAAGTGAAGAAGCATTACTTTTGAATCAGCAAATATTCGAAACAATTTACTAT 935068 Query 112725 GCCGCTCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAG 112784 | ||| | || || |||| || || || || ||| || |||||||| | || Sbjct 935067 GGCGCCTTGGAAGCTAGTTGCGAATTAGCCGAAAAACTTGGCCCCTATGAAACTTACGAA 935008 Query 112785 GGTTCTCCAGCTTCACAAGGG-GTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCT 112843 ||||| || | || ||||| | || || | ||| ||||||| | | ||||| || Sbjct 935007 GGTTCACCCG-TTAGTAAGGGTATTCTACAGTATGACATGTGGG-ATAAAACACCAA-CT 934951 Query 112844 --TCACTACGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGT 112901 || | | ||| || | ||||| || ||| | | ||| | || ||| | Sbjct 934950 GATCTTTGGAATTGGACCGAATTGAAGGAGAAAATAAAGCAACATGGTGTCCGCAAC--T 934893 Query 112902 CTTT--TGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAAT 112959 |||| || | || || |||||||| || || || |||||||| |||| || ||||| | Sbjct 934892 CTTTACTGCTTGCGCCCATGCCAACTGCTTCAACAGCACAAATTATGGGCAACAATGAGT 934833 Query 112960 GCTTTGAACCCTACACGACGAACATCTAT 112988 |||||||| ||||| | || || ||| Sbjct 934832 CATTTGAACCATACACTTCCAATATTTAT 934804 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620716747820320