Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25]
3,306 sequences; 462,505,359 total letters
Query= NC_015280.1
Length=181044
Score E
Sequences producing significant alignments: (Bits) Value
seq2681 86.0 7e-12
>seq2681
Length=201357
Score = 86.0 bits (94), Expect = 7e-12
Identities = 169/246 (69%), Gaps = 8/246 (3%)
Strand=Plus/Minus
Query 154864 TGTCATGTATTATGATTACATACCCATCTACACATGGTGTATTTGAAACTAACATTAGAC 154923
|||| ||| | ||||| || || ||||| ||| ||||||||||| | || |
Sbjct 78442 TGTCCTGTCTGATGATCACCTATCCATCCACAATGGGTGTATTTGAGGAGACTGTTG--C 78385
Query 154924 AGATATGTAAGATCGTTCATG-ACAA---TGGTGGTCAGGTATATCTTGATGGAGCAAAT 154979
||||| | |||| |||| |||| ||| ||||||||||| | || || || |||
Sbjct 78384 TGATATATGCGATC--TCATCCACAAACATGGCGGTCAGGTATACTTGGACGGCGCTAAT 78327
Query 154980 CTAAATGCACAGGTAGGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCTA 155039
| |||||||| || || ||| || | || ||||| ||||| | ||| |
Sbjct 78326 ATGAATGCACAAGTGGGTCTATGTCGTCCCGGGGATTATGGCAGTGATGTCTCTCACTTG 78267
Query 155040 AACTTACATAAAACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATA 155099
|| ||||||| || ||||| || || ||||| || || |||||||| | ||||||||
Sbjct 78266 AATCTACATAAGACTTTCTGCATACCGCATGGCGGGGGCGGTCCTGGTATGGGTCCTATT 78207
Query 155100 GGTGTA 155105
|| |||
Sbjct 78206 GGCGTA 78201
Score = 86.0 bits (94), Expect = 7e-12
Identities = 110/152 (72%), Gaps = 0/152 (0%)
Strand=Plus/Minus
Query 153876 GATAGTGAAGGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGG 153935
|||| || || ||| | || ||| | | ||| | ||||| | ||||||||||| |
Sbjct 79460 GATATGGACGGCAATGATGCCTACCGCCTGGCATTGCAGACACGTGAGCAGCATATACGT 79401
Query 153936 AGAGACAAAGCAACCAGTAACATCTGCACAGCTCAGGCACTGCTGGCTAATATGTCTGGA 153995
| ||||| ||||| || ||||| ||||| || ||||||||||| || ||||||||||
Sbjct 79400 CGTGACAAGGCAACTAGCAACATTTGCACCGCGCAGGCACTGCTCGCCAATATGTCTGCT 79341
Query 153996 TTCTATGCAGCATATCATGGTGCAGATGGACT 154027
| || || | || || ||| | ||||| ||
Sbjct 79340 ATGTACGCGGTCTACCACGGTCCCGATGGGCT 79309
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 579188864031040
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |