Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25] 3,306 sequences; 462,505,359 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq2681 96.9 4e-15 >seq2681 Length=201357 Score = 96.9 bits (106), Expect = 4e-15 Identities = 170/244 (70%), Gaps = 4/244 (2%) Strand=Plus/Minus Query 159539 TGTCATGTATTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATCAGAC 159598 |||| ||| | ||||| || |||||||| ||| ||||||||||| | || | | Sbjct 78442 TGTCCTGTCTGATGATCACCTATCCATCCACAATGGGTGTATTTGAGG-AGACTGTTG-C 78385 Query 159599 AGATATGTAAGATTG--TTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCT 159656 ||||| | ||| | || | |||| ||||||||||| | || || || ||| | Sbjct 78384 TGATATATGCGATCTCATCCACAAACATGGCGGTCAGGTATACTTGGACGGCGCTAATAT 78325 Query 159657 AAATGCACAGGTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAA 159716 |||||||| || |||||| || | || ||||| ||||| | ||| | || Sbjct 78324 GAATGCACAAGTGGGTCTATGTCGTCCCGGGGATTATGGCAGTGATGTCTCTCACTTGAA 78265 Query 159717 CTTACATAAGACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGG 159776 |||||||||| ||||| || || ||||| || || |||||||| | ||||||||||| Sbjct 78264 TCTACATAAGACTTTCTGCATACCGCATGGCGGGGGCGGTCCTGGTATGGGTCCTATTGG 78205 Query 159777 TGTA 159780 ||| Sbjct 78204 CGTA 78201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588026898784160