Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25] 3,306 sequences; 462,505,359 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq603 89.7 3e-13 >seq603 Length=780983 Score = 89.7 bits (98), Expect = 3e-13 Identities = 148/212 (70%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 ||| || || | ||| ||| |||||||| |||||||| || || | ||| |||| || Sbjct 746007 AACTAAATGTAGAGTGGATTCCTTCTGAATATTATAGTCGGACAGTGTGCGTCCATCCTC 745948 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 || |||||| || || || || | ||||| || ||| | || | || ||||| || Sbjct 745947 CAACTGTTTGCCAGCGAAAATCAAACGTTGTTGATCTGGGGGGATTCCTTCCTTATCTTG 745888 Query 34892 AATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTT 34949 ||| || |||||| || || || | || | |||||| || | || |||||| Sbjct 745887 AATTTTAGCTTTGAC--ATTCTCAATGGTATCGGAAGGCTCAACCTCCAAAGTGATGGTT 745830 Query 34950 TTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 |||||||| | ||| || || || |||||||| Sbjct 745829 TTTCCCGTCAAAGTTTTGACGAAAATCTGCAT 745798 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324620519903568