Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25] 3,306 sequences; 462,505,359 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq2718 217 2e-51 >seq2718 Length=1670031 Score = 217 bits (240), Expect = 2e-51 Identities = 467/690 (68%), Gaps = 6/690 (1%) Strand=Plus/Minus Query 37010 ATCCGCAACAAATTCTATGTATTTACACATTAGTTCATAGTTTATACCAATTAGTTTTAC 37069 ||| || |||||||| || || | ||||||||| | || ||||| ||||| || || Sbjct 71488 ATCAGCCACAAATTCGATATAATCGGACATTAGTTTGCAATTCATACCGATTAGATTCAC 71429 Query 37070 TGGAATTGCATCT-TGAAGAAATAGTTTTTCTATTATTACAGCATCTTTAACTATATTAA 37128 || | || || | ||||| | | | | ||| | ||||| || || ||| | || Sbjct 71428 CGGCAAAGCGTCAGTTAAGAATTCCTGCT-CAATTTTAACAGCTTCAGAAATTATTTCAA 71370 Query 37129 CAATAACTTCTTCAGTTGGGGGATATTTTAAATATTTAAACAATAAACATGCAAAATCAC 37188 ||||| || | | |||| | | |||||| || |||| |||||||| || |||| Sbjct 71369 CAATACGCTCATTACTTGGTTTTTGTATTAAATGTTGGAACATCAAACATGCGAAGTCAC 71310 Query 37189 AATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAAC 37248 |||| | || ||||||| || | |||||| ||||| || || ||||||||||||| Sbjct 71309 AATGAAGTCCCTCATCTCGTGAAATTAGTTCATTGGAAAATGTCAAGCCTGGCATTAAAC 71250 Query 37249 CTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTG 37308 | | ||| |||| ||| || || | |||||| ||| ||||||||||||||||| | Sbjct 71249 CACGTTTCTTAAGCCAGAAGATCGAAGCAAAACTGCCACTGAAGAAAATACCTTCAACGG 71190 Query 37309 CTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTA-TAATCAGAAATCCAttttttt 37367 | |||||||| | | |||| ||| ||||||| | | | ||||||||| Sbjct 71189 CAGCAAATGCAATTACACGTTCACC-AAAGTTGGCCGACTTCGAAGAAATCCAAGCAAGC 71131 Query 37368 GTCCAATCTGCCTT-TAATTTAACACATTCAATTGTTTCAATTGCTTTTAAGAGAAAGtt 37426 | |||||||||||| |||| || | ||||| || || || || || | | || Sbjct 71130 GCCCAATCTGCCTTACGCTTTACGGCAGGC-ATTGTCTCTATAGCATTGAATAAGCAATT 71072 Query 37427 tttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAAT 37486 ||| || || | ||||| |||||||||| || |||||||||||||| || | Sbjct 71071 CCTTTGTTTCGAGTCCTTAATATATGTATCAATTAATATGCTATACATTTCAGAATGCAC 71012 Query 37487 ATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTGAACATCGTT 37546 ||| || || || || ||||| ||||| || || | || || | | ||| || || | Sbjct 71011 ATTCTCCATCGCAATTTGAAATCCATAGAAGCAACGTGCCTCTGTCACTTGGACTTCCTG 70952 Query 37547 AAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAG 37606 | || | | | ||| |||||||| || || |||||| || || || || || | Sbjct 70951 GCAGAAGCGTTCAACTACATTTTCATTCACAATACCATCAGATGCGGCGAAAAAGGCTAA 70892 Query 37607 AACATATTTTATAAAATGTCTTTCATCATTTGATAATTTTTTCCAATCATTAATATCTTT 37666 || | |||||||||| ||||| || | | | |||||||| |||||||| Sbjct 70891 CACGTGGGAAATAAAATGTCGTTCATTATCAGTGAGGCGTGCCCAATCATCCATATCTTT 70832 Query 37667 TGATAAATCAACTTCATCAACGGTCCAAAA 37696 || | ||| ||||| || || ||||| || Sbjct 70831 AGAAAGATCTACTTCCTCTACTGTCCAGAA 70802 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592292322508240