Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25] 3,306 sequences; 462,505,359 total letters Query= NC_019515.1 Length=93839 Score E Sequences producing significant alignments: (Bits) Value seq314 84.2 1e-11 >seq314 Length=932230 Score = 84.2 bits (92), Expect = 1e-11 Identities = 173/254 (68%), Gaps = 5/254 (2%) Strand=Plus/Plus Query 78363 ATATGATTCTTGTAAATATGAGCGTCACCGATTGTGTGAATGAAGTCTCCTACTTCCAG- 78421 |||||||| || || | ||| || || || | ||||| | ||| || ||| | || Sbjct 384074 ATATGATTATTATAGACATGTGCATCGCCCAAAGTGTGGACGAAATCCCCTGGTCGGAGA 384133 Query 78422 TCCGCACAAATGCGCAATAATATGTGTAAGTAATGCGTATGAAGCAATGTTAAATGGAAT 78481 || | | | ||| ||||| |||| ||||| || ||||| || ||||| |||||||| | Sbjct 384134 TCAGTA-ATATGAGCAATCATATAGGTAAGCAAAGCGTACGAGGCAATATTAAATGGTAC 384192 Query 78482 TCCTAAGAATACGTCACCGCTTCGTTGGTACAATTGGCAACTTAGCTTTCCATCAACTGA 78541 || || | || | || |||||||| ||||| ||| || || ||||| | Sbjct 384193 ACCCAATCCCATATCGGCACTGCGTTGGTATAATTGACAAGATAACTCTCCATTGGCA-- 384250 Query 78542 TACGTAAAACTGGAATAGAGTGTGACAAGGCGGTAGTGCCATATCATCTAAGTCAGCAGG 78601 || |||| || ||| |||||||| ||||| ||||| | | | || |||| Sbjct 384251 -ACAAAAAATTGTGCAAGACAATGACAAGGTGGTAGCGCCATTTGAGGGATATCGACAGG 384309 Query 78602 ATTCCAAGCAGACA 78615 |||||||||||||| Sbjct 384310 ATTCCAAGCAGACA 384323 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300147905990800