Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25]
3,306 sequences; 462,505,359 total letters
Query= NC_019515.1
Length=93839
Score E
Sequences producing significant alignments: (Bits) Value
seq314 84.2 1e-11
>seq314
Length=932230
Score = 84.2 bits (92), Expect = 1e-11
Identities = 173/254 (68%), Gaps = 5/254 (2%)
Strand=Plus/Plus
Query 78363 ATATGATTCTTGTAAATATGAGCGTCACCGATTGTGTGAATGAAGTCTCCTACTTCCAG- 78421
|||||||| || || | ||| || || || | ||||| | ||| || ||| | ||
Sbjct 384074 ATATGATTATTATAGACATGTGCATCGCCCAAAGTGTGGACGAAATCCCCTGGTCGGAGA 384133
Query 78422 TCCGCACAAATGCGCAATAATATGTGTAAGTAATGCGTATGAAGCAATGTTAAATGGAAT 78481
|| | | | ||| ||||| |||| ||||| || ||||| || ||||| |||||||| |
Sbjct 384134 TCAGTA-ATATGAGCAATCATATAGGTAAGCAAAGCGTACGAGGCAATATTAAATGGTAC 384192
Query 78482 TCCTAAGAATACGTCACCGCTTCGTTGGTACAATTGGCAACTTAGCTTTCCATCAACTGA 78541
|| || | || | || |||||||| ||||| ||| || || ||||| |
Sbjct 384193 ACCCAATCCCATATCGGCACTGCGTTGGTATAATTGACAAGATAACTCTCCATTGGCA-- 384250
Query 78542 TACGTAAAACTGGAATAGAGTGTGACAAGGCGGTAGTGCCATATCATCTAAGTCAGCAGG 78601
|| |||| || ||| |||||||| ||||| ||||| | | | || ||||
Sbjct 384251 -ACAAAAAATTGTGCAAGACAATGACAAGGTGGTAGCGCCATTTGAGGGATATCGACAGG 384309
Query 78602 ATTCCAAGCAGACA 78615
||||||||||||||
Sbjct 384310 ATTCCAAGCAGACA 384323
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 300147905990800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |