Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25] 3,306 sequences; 462,505,359 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq1558 98.7 8e-16 seq2605 91.5 1e-13 >seq1558 Length=2163639 Score = 98.7 bits (108), Expect = 8e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 28551 AAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCT 28610 |||||||| || || || ||||| ||||| ||||| ||||||||| || || ||| Sbjct 2033945 AAAATGCAGATTTTCGTCAAAACCTTAACTGGTAAGACCATTACCTTAGAGGTCGAGCCT 2034004 Query 28611 TCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGAT 28670 || || || | | || |||| |||||| || |||||||| | ||| |||| Sbjct 2034005 TCTGACACCATCGAAAATGTCAAAGCTAAAATCCAAGATAAAGAGGGCATCCCCCCAGAT 2034064 Query 28671 CAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTAT 28730 |||||| | | ||||| || || || |||||||||||| | || || |||| || Sbjct 2034065 CAACAGCGTTTGATCTTCGCCGGAAAGCAATTGGAAGATGGTCGCACCTTGTCCGACTAC 2034124 Query 28731 AACATTCAAAAAGAATCTACTCTGCACATGGT 28762 ||||| ||||| || || || || || |||| Sbjct 2034125 AACATCCAAAAGGAGTCAACCCTCCATTTGGT 2034156 >seq2605 Length=276952 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 28542 GATTGTGTAAAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAA 28601 |||||| | ||||||||| || |||||||| | |||||||| ||||| || || Sbjct 241885 GATTGTTCAGCAATGCAAATTTTCGTAAAAACCCTTACGGGTAAGACCATCACTCTTGAG 241944 Query 28602 ACGGAACCTTCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTG 28661 || ||||| || || | | || | ||| ||||| || || || ||| | Sbjct 241945 GTTGAGCCTTCGGATACTATTGAACATGTTAAGGCCAAAATTCAAGATAAGGAAGGAATT 242004 Query 28662 CCCGTAGATCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATG 28721 ||| ||||||||| | || || ||||| || || |||||||||||| | || || Sbjct 242005 CCCCCTGATCAACAGCGTCTAATTTTTGCCGGAAAGCAATTGGAAGATGGTCGCACATTG 242064 Query 28722 GCCGATTATAACATTCAAAAAGAATCTACTCTGCA 28756 || || ||||| ||||| ||||| ||||| |||| Sbjct 242065 GCTGACTATAATATTCAGAAAGAGTCTACATTGCA 242099 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425387659642974