Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25] 3,306 sequences; 462,505,359 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq3107 109 3e-19 >seq3107 Length=1323484 Score = 109 bits (120), Expect = 3e-19 Identities = 154/214 (72%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 25933 CATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTT 25992 |||||||| ||| || ||||||| |||||||| |||||||| || | |||||||| Sbjct 935662 CATAAATAGATCAGGTATCCACAAAGCATAAAACAAATCTCTGGCGCGATGCTCTTCTTT 935721 Query 25993 TCC-GTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAAT 26051 || ||| || || || | ||| || || | |||||||| | ||||||||||| | | Sbjct 935722 CCCAGTGTTT-TTCTTCAAATCCAAAAATTGGAAAATATCAGCATGCCATGGTTCCAGGT 935780 Query 26052 AGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCAT 26111 |||| ||||| ||| | ||| || ||||||||||| || || | ||| | || Sbjct 935781 AGATGGCAAATGCGCCTGGACGTTTACCGCCACCTTGATCCACATAGCGTGCTACATTAT 935840 Query 26112 TGAAAACTTTCAACATTGGAACTAATCCAGTTGA 26145 |||| ||| |||||| || || || || |||| Sbjct 935841 TGAACACTCGCAACATAGGCACCAAACCGTTTGA 935874 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253029804543950