Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25]
3,306 sequences; 462,505,359 total letters
Query= NC_020845.1
Length=180977
Score E
Sequences producing significant alignments: (Bits) Value
seq2681 100 3e-16
>seq2681
Length=201357
Score = 100 bits (110), Expect = 3e-16
Identities = 172/244 (70%), Gaps = 8/244 (3%)
Strand=Plus/Plus
Query 138182 TACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATG 138241
||| ||||||||||| | |||||||| || || ||||| || || ||||| ||||||||
Sbjct 78201 TACGCCAATAGGACCCATACCAGGACCGCCCCCGCCATGCGGTATGCAGAAAGTCTTATG 78260
Query 138242 TAAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGC 138301
|| ||| | ||| | ||||| ||||| || | || |||||| || |||||
Sbjct 78261 TAGATTCAAGTGAGAGACATCACTGCCATAATCCCCGGGACGACATAGACCCACTTGTGC 78320
Query 138302 ATTTAGATTTGCACCATCGAGATATACCTGACCACCA---TTGT-CATGAACGATCTTAC 138357
||| | ||| || || || | ||||||||||| ||| |||| |||| |||| |
Sbjct 78321 ATTCATATTAGCGCCGTCCAAGTATACCTGACCGCCATGTTTGTGGATGA--GATCGCAT 78378
Query 138358 ATATCTGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATAC 138417
||||| | | || | ||||||||||| || |||||||| || ||||| | ||
Sbjct 78379 ATATCAG-CAACAGTCT-CCTCAAATACACCCATTGTGGATGGATAGGTGATCATCAGAC 78436
Query 138418 ATGA 138421
| ||
Sbjct 78437 AGGA 78440
Score = 84.2 bits (92), Expect = 3e-11
Identities = 106/146 (73%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 139260 AGTCCATCTGCACCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGT 139319
|| ||||| | ||| || || | || || | |||||||||| ||||||||||| ||
Sbjct 79309 AGCCCATCGGGACCGTGGTAGACCGCGTACATAGCAGACATATTGGCGAGCAGTGCCTGC 79368
Query 139320 GCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGT 139379
|| ||||| ||||| || ||||| ||||| | | ||||||||||| | || || | |
Sbjct 79369 GCGGTGCAAATGTTGCTAGTTGCCTTGTCACGACGTATATGCTGCTCACGTGTCTGCAAT 79428
Query 139380 GCTAATCTGTATGCAGGATTGCCTTC 139405
|| | | ||| ||| |||||| ||
Sbjct 79429 GCCAGGCGGTAGGCATCATTGCCGTC 79454
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578974472891120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |