Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25] 3,306 sequences; 462,505,359 total letters Query= NC_021806.1 Length=100418 Score E Sequences producing significant alignments: (Bits) Value seq2014 89.7 3e-13 >seq2014 Length=368556 Score = 89.7 bits (98), Expect = 3e-13 Identities = 128/178 (72%), Gaps = 2/178 (1%) Strand=Plus/Minus Query 96132 TTTAAAGCCTTCTTCTAG-AATTTTCTGAGCTAATACTGTAGCTGTGGTTGTTCCATCTC 96190 || ||| ||||||| ||| |||| | | ||||||||||||||||||||||| ||||| | Sbjct 15281 TTCAAAACCTTCTT-TAGCAATTGCCCGCGCTAATACTGTAGCTGTGGTTGTACCATCAC 15223 Query 96191 CTACTTCTGTATTAGTATTCTCAGCTACTTGTTTAATCATTTGAGCACCTAAGTTTTCAA 96250 | |||| ||| ||||| | ||| || | || | || || ||||| | |||| | Sbjct 15222 CAGCTTCCTCATTTGTATTATTAGCAACATCTTGTACCAATTTTGCACCAATATTTTGGA 15163 Query 96251 ATGGATCTTCTAAATGAATTTCTCTAGCCACACTTACACCATCTTTAGTAATGATTGG 96308 || ||| | ||| | || | |||| ||| |||||||||| || || || |||| Sbjct 15162 ATTTATCCTTTAACTCTATAGATTTAGCAACAGTTACACCATCCTTGGTTATTTTTGG 15105 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 321199857734014