Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25] 3,306 sequences; 462,505,359 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq3107 381 5e-101 seq603 138 1e-27 seq1558 118 1e-21 >seq3107 Length=1323484 Score = 381 bits (422), Expect = 5e-101 Identities = 1177/1797 (65%), Gaps = 63/1797 (4%) Strand=Plus/Plus Query 138153 TTTATCTACAGTAAACTTTATGGCATCAGCGGCTGGTTTCGTTCTCAGATAATACATTCC 138212 |||||| |||||||| | ||| |||| || ||||||||||| | || ||||||||| || Sbjct 934417 TTTATCCACAGTAAATTGTATAGCATTTGCAGCTGGTTTCGTACGCAAATAATACATGCC 934476 Query 138213 CGTTTTTAACCCATTTTCCCAGGCGTACATGTGTATCGAAGTGAG-TAACGCGTAAGTCG 138271 ||| || | || | |||| || | | ||||| ||||| || | || | || | | Sbjct 934477 CGTCTTGAGACCTGCCTTCCAGCCGAAGAAATGTATAGAAGTAAGCTTAC-CATAGTTGG 934535 Query 138272 GTTTCGCCAGAAATATGTTAAACGATTGACTCTGATCGATGAAAGCGCCTCGATCAATGG 138331 | | |||| |||||| ||||| ||||| ||||||||||| || || ||||| | Sbjct 934536 GCTCAGCCACGTGTATGTTGAACGACTGACTTTGATCGATGAATGCACCGCGATCTGCAG 934595 Query 138332 CCATGTTAATTAAATTTTTACTTTTCATCTCCCACACGGTCTTGTATAGATCACGAATAT 138391 |||| || ||| | |||| |||||||| || || ||||||||||| || || | Sbjct 934596 CCATTTTGATTGATGTTTTCACGGAAATCTCCCAAACAGTTTTGTATAGATCGCGTATGT 934655 Query 138392 GTCGCGGTATTGTTGCAATATTTTGAATGCTCCCGTTGGCCGCAATGATGCGATTTCTCA 138451 | | ||||| | | |||||||||| ||| ||| | || || ||| ||| Sbjct 934656 GCTGTGGTATGGATTCAATATTTTGTATGGAGCCGCGACTGGTTATAATATTATTCTTCA 934715 Query 138452 TGTCATCGTTGTACAGATTCAACTTGATCAAGTCGTTTATCAGATATCTGTTTATGACCT 138511 | ||||| | ||| | ||||| | | | ||| | || | |||| || | Sbjct 934716 TATCATCATCCCACAAACCCAACTCGGTTAGATCGCGCAACAAGTGATGATTTACAACTT 934775 Query 138512 GAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAACGATT 138571 |||||||||| | | || ||||| ||||| ||| ||| | || ||||| || | Sbjct 934776 GAAATTCACCTGAAAGCACACGACGTGTATAAATATTGGAAGTGTATGGTTCAAATGACT 934835 Query 138572 CGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAGAGAAT 138631 | ||||| |||| ||| || || || | || || |||||| ||| | || | ||| | Sbjct 934836 CATTGTTGCCCATAATTTGTGCTGTTGAAGCAGTTGGCATGGGCGCAAGCAGTAAAGAGT 934895 Query 138632 TCCGTAAACCGTGAAGCTTGATTCGTTCCTTGAGCGACGACCAGTCCCACAAATCGCTAG 138691 | || | ||| || |||| ||| ||||| | | ||| | ||| | ||| | | Sbjct 934896 TGCGGACACCATGTTGCTTTATTTTCTCCTTCAATTCGGTCCAATTCCAAAGATCAGTTG 934955 Query 138692 GTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACTGCCTTCGTACG 138751 || |||| | |||||| || ||||||| || ||| ||| |||| |||||||| | Sbjct 934956 GTGTTTTATCCCACATGTCATACTGTAGAATACCCTTACTAACGGGTGAACCTTCGTAAG 935015 Query 138752 AATCGTATACACCAAACTCTTGCGCCAACTCGTTGCTCGCCTCGAGCGCACCATAGTAAA 138811 || || |||| | || || || ||| || || || | || |||||||||| Sbjct 935016 TTTCATAGGGGCCAAGTTTTTCGGCTAATTCGCAACTAGCTTCCAAGGCGCCATAGTAAA 935075 Query 138812 TAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCGTACGGCATGCGGA 138871 | |||||| || |||||||| | | | || || | || ||||| || || | Sbjct 935076 TTGTTTCGAATATTTGCTGATTCAAAAGTAATGCTTCTTCACTTTCGTATGGATAACGCA 935135 Query 138872 GCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGCGATGGCGCAGAT 138931 | | || ||||| || | || || || || | |||| || ||||| | | || Sbjct 935136 TTAAAATTAAAGCGTCAGCAAAACCCTGTACTCCAATACCGATGGGACGATGTCTGAAAT 935195 Query 138932 TTGACGCTTTTGCGGCTTCGATA--GGATAATAGTTTACATCGATGATTTTGTTTAAATT 138989 | || |||| || || || ||||||| || | || || ||||| || ||||| Sbjct 935196 TCGATTTCCTTGC--CTCCGGTAAGGGATAATGATTAATGTCTATTATTTTATTCAAATT 935253 Query 138990 TCGCACGACCACCTTAGTCGTATGCTTTAATCGTTCAAAATCGTATGTGCCCCCGTTGTC 139049 || || || || | || | || | ||| ||||| || || || Sbjct 935254 ACGTGTAACGGTTTTGGTGACCTCTTTGAGGCGCTTAAAGTCGTACGTT------TTTTC 935307 Query 139050 GTCGACGACGTCGACAAATTTGTTGACACAAATCGAGGCTATGTTGCACACCGCCACTTC 139109 | | || |||||| | || | || || || | ||||||||| || || || Sbjct 935308 G-----GGTGT-GACAAACATATTCAACGCGATTGAAGCCAAGTTGCACACAGCTACCTC 935361 Query 139110 GTCGGGGTCGCTG--TATTCGACAATTTCGGCACACAAATTACTACACTTGATCGTACCT 139167 || || |||| ||||| |||||||||| ||| |||||||||||||| || ||||| Sbjct 935362 ATCAGGT--GCTGAATATTCCACAATTTCGGTACATAAATTACTACACTTAATTGTACCA 935419 Query 139168 AAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATACGGTGTGCCA 139227 | ||| |||||||| || ||||| |||||||||||||| || | ||| || |||||||| Sbjct 935420 ACATTCTGTTGATTACTCTTTCGATTACAAGCATCTTTATACAACATGTATGGTGTGCCG 935479 Query 139228 GTTTCCACTTGTGTCTCTATAATGAATTTGAAC--AAGTCCCT-AGCTTGTATTTGACGC 139284 || |||||||| | || |||||| | ||| ||| | | |||| || || | Sbjct 935480 GTCTCCACTTGCGATTCAATAATG---CTAAACCAAAGACTTTGTGCTTTTACTT-TCTT 935535 Query 139285 ACGTA--AAGTTCGTCGCGCTCGTACTTTTCGTAGAGTTCGTCGAATCGTTCACCGTAGG 139342 | || | || | || | || || || || | || ||||| |||||| | Sbjct 935536 A-TTAGCACGTCCTTCCTGTTCATATTTCAGATATAATTTTTCGAACTCTTCACCCCATA 935594 Query 139343 CGTCAGAAAGATCGCGACACTTGTCAGGACACATGAGCGACCATACGCCGTTCGCCTTGA 139402 | ||| ||| || ||||||||| |||||||| |||||||| | | || || | | Sbjct 935595 CTTCATGTAGACCGGGACACTTGTGTGGACACATTAGCGACCAGTCTTCATTGGCTTCTA 935654 Query 139403 CGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAACAGCAAATCGC--GCGC-CTTCT 139459 | || |||| || ||||| || ||||||||||| | | |||||| | |||| | || Sbjct 935655 CACGTTTCATAAATAGATCAGGTATCCACAAAGCATAAAACAAATCTCTGGCGCGATGCT 935714 Query 139460 TATCTTCCGAACCCATGTTACGTTTCATGTTAAGGAAATCAAAAACGTCAGCGTGCCATG 139519 |||| | || |||| |||| | | || | |||| ||||| ||||||| Sbjct 935715 CTTCTTTC---CCAGTGTTTTTCTTCAAATCCAAAAATTGGAAAATATCAGCATGCCATG 935771 Query 139520 GTTCCAGATAGATGGCCATTGCGCCTTTCCGTTT---GCCACCTTGATCGACGTGTCGTA 139576 ||||||| |||||||| | ||||||| ||||| |||||||||||| || | ||| Sbjct 935772 GTTCCAGGTAGATGGCAAATGCGCCTGGACGTTTACCGCCACCTTGATCCACATAGCGTG 935831 Query 139577 CAGCATTATTGAATACGCGCAACATCGGCTCCAGACCGCTCGCTGTTCCGTTGGT----G 139632 | |||||||||| || |||||||| ||| ||| |||| | | ||| || || || | Sbjct 935832 CTACATTATTGAACACTCGCAACATAGGCACCAAACCGTTTGATGTGCCATTTGTACCCG 935891 Query 139633 CTACGGATGGGACTGTTGCGAGCTCGGACGTCATGTACATTGATGCCGATTCCGCCGCCA 139692 | | | | | || || || || | | |||||| || | || || || || || Sbjct 935892 CAATTGCAGTGCCTTTT----GCACGTATGCAATGTACGTTCAGACCAATACCCCCAGCA 935947 Query 139693 AATTTGGATATTAAAACGCAATCGCGT---AATGTCTCGTATATACCTCTTATGCTGTCG 139749 ||||||| || || | || | || |||| | | || || ||| ||| Sbjct 935948 GATTTGGAAATCAATGCACATTGATGTGCCGATGT---GAAAATCCCATCAATGGAATCG 936004 Query 139750 TCCTGCATCGTGACCAGAAAGCATGACGAAAGTTGCGGTAGTTTCGTGCCGGCTGCAAAC 139809 ||| ||| || | ||||||||||| || | |||||| | || ||| | || || || Sbjct 936005 TCCACCATGGTCAGTAGAAAGCATGATGACAATTGCGGCTGCTTGGTGGCAGCAGCGAAT 936064 Query 139810 AGAGTAGGACTCGCGTGCGTGAACATTTGTTTCGACATCAATTCGTACGTTTCGATGGC- 139868 || || ||| || ||||| || ||| || | ||| | ||| |||||||| || Sbjct 936065 AGCGTTGGAGAAGCATGCGTAAAATAACGTTCGGAAAGCAAGTTGTATGTTTCGATTGCT 936124 Query 139869 GC-TCACAATATCCCTT--CCGTGGATACCGACAGAGACTCGCATCAGCATATGTTG 139922 || || ||| ||| || || ||||||| | || ||||| | |||||| || Sbjct 936125 GCATC----TATGTCTTCGCCATGTATACCGATGGCAACACGCATTAACATATGCTG 936177 >seq603 Length=780983 Score = 138 bits (152), Expect = 1e-27 Identities = 168/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| |||| || || || || ||||| || || | ||||| || || | Sbjct 747553 ATGCAAATCTTCGTTAAGACCCTCACTGGCAAAACCATCACCTTGGAAGTCGAGCCCTCA 747612 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || ||||||||||| |||||||| || || || |||||| Sbjct 747613 GATACCATTGAGAATGTTAAGGCTAAGATCCAAGATAAAGAAGGCATTCCACCAGATCAA 747672 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||||||||||| |||||||| || || || |||||| | | |||| || || || Sbjct 747673 CAACGTTTGATTTTTGCCGGCAAGCAACTTGAGGATGGACGTACTTTGTCCGACTACAAT 747732 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCG 24932 || || |||||||||||||| || |||||| | || | |||||||||| Sbjct 747733 ATACAGAAGGAATCGACACTCCATTTGGTGCTACGTCTTCGCGGAGGCG 747781 Score = 131 bits (144), Expect = 2e-25 Identities = 158/212 (75%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | || || | || || || || || || || || || ||| | || Sbjct 745570 ATGCAAATCTTCGTGAAGACCTTGACTGGCAAGACCATCACTCTGGAGGTTGAACCATCC 745629 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | |||| || ||| ||||| ||||||||||||||||| || || |||||| Sbjct 745630 GATACTATTGAAAATGTTAAAGCTAAGATTCAAGACAAAGAAGGAATCCCCCCAGATCAA 745689 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACA---TGTCAGATTAT 24880 |||||||| ||||||||||| ||||| ||||| || || || || |||| ||||| Sbjct 745690 CAACGTTTAATCTTTGCCGGTAAACAACTGGAAGA--CG-GACGCACTCTGTCCGATTAC 745746 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGT 24912 ||||| || ||||| || ||||| || ||||| Sbjct 745747 AACATCCAGAAGGAGTCTACACTTCATTTGGT 745778 Score = 125 bits (138), Expect = 6e-24 Identities = 157/213 (74%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 24719 AAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC-GACACAGTAGAAAC 24777 || || || || || ||||| || || | ||||| || |||| | ||||| | || | Sbjct 747340 AAGACCCTCACTGGCAAAACCATCACCTTGGAAGTTGA-GCCATCTGACACCATTGAGAA 747398 Query 24778 GGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTT 24837 || ||| || |||||||| || |||||||| || || ||||||||||||||||| || Sbjct 747399 TGTCAAAGCCAAAATCCAAGATAAGGAAGGAATCCCACCAGATCAACAACGTTTGATTTT 747458 Query 24838 TGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATC 24897 |||||| || || |||||||| | | | |||| || || |||||||| |||||||| Sbjct 747459 TGCCGGCAAGCAATTGGAGGATGGACGTACCTTGTCCGACTACAACATTCAGAAGGAATC 747518 Query 24898 GACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || ||||| || | || ||||| || || Sbjct 747519 AACCCTCCACTTAGTCCTTCGCTTGCGTGGTGG 747551 Score = 116 bits (128), Expect = 3e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | ||||| | || || ||||| || || | || || || | || Sbjct 745798 ATGCAGATTTTCGTCAAAACTTTGACGGGAAAAACCATCACTTTGGAGGTTGAGCCTTCC 745857 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || ||| || || ||||| || |||||||| || || |||||| Sbjct 745858 GATACCATTGAGAATGTCAAAGCTAAAATTCAAGATAAGGAAGGAATCCCCCCAGATCAA 745917 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACA-TGTCAGATTATAA 24882 ||||||||||| || || || |||||| ||||||| | || ||| |||| || ||||| Sbjct 745918 CAACGTTTGATTTTCGCTGGCAAACAGTTGGAGGA-TGGACGCACACTGTCCGACTATAA 745976 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||| |||||||| || ||||| || || | || || || || || Sbjct 745977 TATTCAGAAGGAATCCACTCTACATTTAGTTCTACGCTTACGTGGTGG 746024 >seq1558 Length=2163639 Score = 118 bits (130), Expect = 1e-21 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | ||||| |||| ||||| || ||||| | || || || | | Sbjct 2033948 ATGCAGATTTTCGTCAAAACCTTAACTGGTAAGACCATTACCTTAGAGGTCGAGCCTTCT 2034007 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | |||| || ||| || |||||||| ||||| || || || || |||||| Sbjct 2034008 GACACCATCGAAAATGTCAAAGCTAAAATCCAAGATAAAGAGGGCATCCCCCCAGATCAA 2034067 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||||||||||| ||||| || || |||| ||| | | | |||| || || ||| Sbjct 2034068 CAGCGTTTGATCTTCGCCGGAAAGCAATTGGAAGATGGTCGCACCTTGTCCGACTACAAC 2034127 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 || |||||||| || || || || ||||| |||| Sbjct 2034128 ATCCAAAAGGAGTCAACCCTCCATTTGGTTCTGCG 2034162 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449879007981680