Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25]
3,306 sequences; 462,505,359 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq1558 109 4e-19
seq603 93.3 3e-14
>seq1558
Length=2163639
Score = 109 bits (120), Expect = 4e-19
Identities = 152/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824
||| |||| || | ||| |||||| || ||||| ||||| || | | |||| ||||
Sbjct 2034160 CAGAACCAAATGGAGGGTTGACTCCTTTTGGATGTTGTAGTCGGACAAGGTGCGACCATC 2034101
Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
|||| |||||||||||||||||||| || || || ||| | || | ||||| || ||
Sbjct 2034100 TTCCAATTGCTTTCCGGCGAAGATCAAACGCTGTTGATCTGGGGGGATGCCCTCTTTATC 2034041
Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944
| ||||| |||||| | | || | ||| | |||||| || | ||| |||||
Sbjct 2034040 TTGGATTTTAGCTTTGACATTTTCGATGGTGTCAGAAGGCTCGACCTCTAAGGTAATGGT 2033981
Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||| || || | ||| || || || ||||||||
Sbjct 2033980 CTTACCAGTTAAGGTTTTGACGAAAATCTGCAT 2033948
>seq603
Length=780983
Score = 93.3 bits (102), Expect = 3e-14
Identities = 141/199 (71%), Gaps = 4/199 (2%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| | ||| | ||| |||||||||||||| ||||| || | | | || ||||
Sbjct 747536 AGGACTAAGTGGAGGGTTGATTCCTTCTGAATGTTGTAGTCGGACAAGGTACGTCCATCC 747477
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|||| |||||| ||||| || |||| ||||| || ||| | || | || ||||| ||
Sbjct 747476 TCCAATTGCTTGCCGGCAAAAATCAAACGTTGTTGATCTGGTGGGATTCCTTCCTTATCT 747417
Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943
| ||||| |||||| || || || | ||| | ||| || || | ||| ||||
Sbjct 747416 TGGATTTTGGCTTTGAC--ATTCTCAATGGTGTCAGATGGCTCAACTTCCAAGGTGATGG 747359
Query 34944 TCTTTCCCGTGAGGGTCTT 34962
| || || |||||||||||
Sbjct 747358 TTTTGCCAGTGAGGGTCTT 747340
Score = 84.2 bits (92), Expect = 1e-11
Identities = 136/194 (70%), Gaps = 4/194 (2%)
Strand=Plus/Minus
Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846
||||||||||| |||||||| || || |||| |||| |||| || || || |||||
Sbjct 745988 TCCTTCTGAATATTATAGTCGGACAGTGTGCGTCCATCCTCCAACTGTTTGCCAGCGAAA 745929
Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906
|||| ||||| || ||| | || | || ||||| || | ||||| |||||| ||
Sbjct 745928 ATCAAACGTTGTTGATCTGGGGGGATTCCTTCCTTATCTTGAATTTTAGCTTTGAC--AT 745871
Query 34907 GCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTA 34964
|| || | || | ||| || || | || ||||| |||||||| | || || |
Sbjct 745870 TCTCAATGGTATCGGAAGGCTCAACCTCCAAAGTGATGGTTTTTCCCGTCAAAGTTTTGA 745811
Query 34965 CAAAGATCTGCATG 34978
| || |||||||||
Sbjct 745810 CGAAAATCTGCATG 745797
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325679677226414
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |