Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25]
3,306 sequences; 462,505,359 total letters
Query= NC_026430.1
Length=125767
Score E
Sequences producing significant alignments: (Bits) Value
seq603 107 2e-18
seq2605 86.0 5e-12
>seq603
Length=780983
Score = 107 bits (118), Expect = 2e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 106257 AAAATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCC 106316
||||||||||| || || || || ||||||||||||||||| || |||| |||||
Sbjct 745567 AAAATGCAAATCTTCGTGAAGACCTTGACTGGCAAGACCATCACTCTGGAGGTTGAACCA 745626
Query 106317 GGCGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGAT 106376
|||| || ||| | || ||| || ||| ||||||||||| | ||| |||
Sbjct 745627 TCCGATACTATTGAAAATGTTAAAGCTAAGATTCAAGACAAAGAAGGAATCCCCCCAGAT 745686
Query 106377 CAACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTAC 106436
|||||| | | || | ||| || |||||| | ||||| ||| || |||||||
Sbjct 745687 CAACAACGTTTAATCTTTGCCGGTAAACAACTGGAAGACGGACGCACTCTGTCCGATTAC 745746
Query 106437 AACATACAAAAAGAATCTACACTACATTTAGT 106468
||||| || || || |||||||| ||||| ||
Sbjct 745747 AACATCCAGAAGGAGTCTACACTTCATTTGGT 745778
>seq2605
Length=276952
Score = 86.0 bits (94), Expect = 5e-12
Identities = 157/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 106243 TTTATAAGA--GTTTAAAAATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTAC 106300
||| ||||| ||| | |||||||||||| || ||||| | || || |||||||| ||
Sbjct 241878 TTTGTAAGATTGTTCAGCAATGCAAATTTTCGTAAAAACCCTTACGGGTAAGACCATCAC 241937
Query 106301 CGTGGAAACAGAACCCGGCGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGA 106360
| || || || ||| || ||| || || || |||||| || || ||
Sbjct 241938 TCTTGAGGTTGAGCCTTCGGATACTATTGAACATGTTAAGGCCAAAATTCAAGATAAGGA 241997
Query 106361 AGGCGTGCCCGTTGATCAACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAA 106420
||| | ||| ||||||||| | || |||| ||| || || ||||| |||||| |
Sbjct 241998 AGGAATTCCCCCTGATCAACAGCGTCTAATTTTTGCCGGAAAGCAATTGGAAGATGGTCG 242057
Query 106421 AACTATGGGCGATTACAACATACAAAAAGAATCTACACTACATTTAGTA 106469
|| ||| || || || || || ||||| |||||| | |||||||||
Sbjct 242058 CACATTGGCTGACTATAATATTCAGAAAGAGTCTACATTGCATTTAGTA 242106
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 402313389386048
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |