Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25] 3,306 sequences; 462,505,359 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq603 107 2e-18 seq2605 86.0 5e-12 >seq603 Length=780983 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 106257 AAAATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCC 106316 ||||||||||| || || || || ||||||||||||||||| || |||| ||||| Sbjct 745567 AAAATGCAAATCTTCGTGAAGACCTTGACTGGCAAGACCATCACTCTGGAGGTTGAACCA 745626 Query 106317 GGCGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGAT 106376 |||| || ||| | || ||| || ||| ||||||||||| | ||| ||| Sbjct 745627 TCCGATACTATTGAAAATGTTAAAGCTAAGATTCAAGACAAAGAAGGAATCCCCCCAGAT 745686 Query 106377 CAACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTAC 106436 |||||| | | || | ||| || |||||| | ||||| ||| || ||||||| Sbjct 745687 CAACAACGTTTAATCTTTGCCGGTAAACAACTGGAAGACGGACGCACTCTGTCCGATTAC 745746 Query 106437 AACATACAAAAAGAATCTACACTACATTTAGT 106468 ||||| || || || |||||||| ||||| || Sbjct 745747 AACATCCAGAAGGAGTCTACACTTCATTTGGT 745778 >seq2605 Length=276952 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 106243 TTTATAAGA--GTTTAAAAATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTAC 106300 ||| ||||| ||| | |||||||||||| || ||||| | || || |||||||| || Sbjct 241878 TTTGTAAGATTGTTCAGCAATGCAAATTTTCGTAAAAACCCTTACGGGTAAGACCATCAC 241937 Query 106301 CGTGGAAACAGAACCCGGCGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGA 106360 | || || || ||| || ||| || || || |||||| || || || Sbjct 241938 TCTTGAGGTTGAGCCTTCGGATACTATTGAACATGTTAAGGCCAAAATTCAAGATAAGGA 241997 Query 106361 AGGCGTGCCCGTTGATCAACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAA 106420 ||| | ||| ||||||||| | || |||| ||| || || ||||| |||||| | Sbjct 241998 AGGAATTCCCCCTGATCAACAGCGTCTAATTTTTGCCGGAAAGCAATTGGAAGATGGTCG 242057 Query 106421 AACTATGGGCGATTACAACATACAAAAAGAATCTACACTACATTTAGTA 106469 || ||| || || || || || ||||| |||||| | ||||||||| Sbjct 242058 CACATTGGCTGACTATAATATTCAGAAAGAGTCTACATTGCATTTAGTA 242106 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 402313389386048