Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25] 3,306 sequences; 462,505,359 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq603 140 3e-28 seq1558 134 1e-26 seq3107 107 2e-18 seq2605 104 2e-17 >seq603 Length=780983 Score = 140 bits (154), Expect = 3e-28 Identities = 155/205 (76%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAG--TCGTCGAGCT 134568 ||||| ||||||||||| ||||| || |||||| || ||||| | || || | || Sbjct 746000 TGTAGAGTGGATTCCTTCTGAATATTATAGTCGG--ACAGTGTGCGTCCATCCTCCAACT 745943 Query 134569 GTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTT 134628 ||||||| || ||||||||||| || ||||| || || || ||||| || |||||||||| Sbjct 745942 GTTTGCCAGCGAAAATCAAACGTTGTTGATCTGGGGGGATTCCTTCCTTATCTTGAATTT 745883 Query 134629 TTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGG 134688 | |||||| || | || ||||| | || || || | ||| |||||||| || | Sbjct 745882 TAGCTTTGACATTCTCAATGGTATCGGAAGGCTCAACCTCCAAAGTGATGGTTTTTCCCG 745823 Query 134689 TTAAAGTTTTAACGAAAATTTGCAT 134713 | |||||||| |||||||| ||||| Sbjct 745822 TCAAAGTTTTGACGAAAATCTGCAT 745798 Score = 116 bits (128), Expect = 4e-21 Identities = 150/207 (72%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGT 134570 || || || || ||||| || |||||||| ||| | ||| | ||| || || ||| Sbjct 745772 TGAAGTGTAGACTCCTTCTGGATGTTGTAATCGGACAGAGTGCGTCCGTCTTCCAGTTGT 745713 Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630 || || ||||| || ||||| || ||||| || || || |||||||| |||||||| || Sbjct 745712 TTACCGGCAAAGATTAAACGTTGTTGATCTGGGGGGATTCCTTCTTTGTCTTGAATCTTA 745653 Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690 ||| || || | || ||||| | ||| || || ||||| ||||| || || || Sbjct 745652 GCTTTAACATTTTCAATAGTATCGGATGGTTCAACCTCCAGAGTGATGGTCTTGCCAGTC 745593 Query 134691 AAAGTTTTAACGAAAATTTGCATTTTG 134717 || || || ||||| |||||||||||| Sbjct 745592 AAGGTCTTCACGAAGATTTGCATTTTG 745566 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||| | || || | ||| | || || || |||||||| || || ||||||||| Sbjct 747779 CCTCCGCGAAGACGTAGCACCAAATGGAGTGTCGATTCCTTCTGTATATTGTAGTCGGAC 747720 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || | || || || || ||||| |||||||||||||| || ||||| || || Sbjct 747719 AAAGTACGTCCATCCTCAAGTTGCTTGCCGGCAAAAATCAAACGTTGTTGATCTGGTGGA 747660 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||||||||| ||||| || || || || || | || || || | || || Sbjct 747659 ATGCCTTCTTTATCTTGGATCTTAGCCTTAACATTCTCAATGGTATCTGAGGGCTCGACT 747600 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | || |||||||| || || | || |||||||| |||||||| Sbjct 747599 TCCAAGGTGATGGTTTTGCCAGTGAGGGTCTTAACGAAGATTTGCAT 747553 Score = 95.1 bits (104), Expect = 1e-14 Identities = 129/180 (72%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569 ||| || || |||||||| ||||||||||||||| | ||| | || || | || Sbjct 747528 GTGGAGGGTTGATTCCTTCTGAATGTTGTAGTCGGACAAGGTACGTCCATCCTCCAATTG 747469 Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629 ||||| |||||||||||||| || ||||| || || || ||||| || ||||| ||||| Sbjct 747468 CTTGCCGGCAAAAATCAAACGTTGTTGATCTGGTGGGATTCCTTCCTTATCTTGGATTTT 747409 Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689 |||||| || | ||||| || | || || || | || |||||||| || || Sbjct 747408 GGCTTTGACATTCTCAATGGTGTCAGATGGCTCAACTTCCAAGGTGATGGTTTTGCCAGT 747349 Score = 86.0 bits (94), Expect = 6e-12 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 134604 GGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCC 134663 || || || || || || ||||||||| ||| || || | ||| ||||| | ||| Sbjct 746135 GGAATACCCTCCTTGTCCTGAATTTTTGCTTTAACGTTTTCAATTGTATCGGAAGGTTCA 746076 Query 134664 ACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || ||||| |||||||| ||||||||||||||||| |||||||| Sbjct 746075 ACCTCCAGCGTAATTGTTTTACCCGTTAAAGTTTTAACGAAGATTTGCAT 746026 >seq1558 Length=2163639 Score = 134 bits (148), Expect = 1e-26 Identities = 154/207 (74%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGT 134570 || || || || |||||||| |||||||||||| | |||| || || || | || Sbjct 2034150 TGGAGGGTTGACTCCTTTTGGATGTTGTAGTCGGACAAGGTGCGACCATCTTCCAATTGC 2034091 Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630 || || || || ||||||||||| ||||| || || ||||| ||||| ||||| ||||| Sbjct 2034090 TTTCCGGCGAAGATCAAACGCTGTTGATCTGGGGGGATGCCCTCTTTATCTTGGATTTTA 2034031 Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690 |||||| || | ||||| || | || || || | |||||||| ||||| ||| Sbjct 2034030 GCTTTGACATTTTCGATGGTGTCAGAAGGCTCGACCTCTAAGGTAATGGTCTTACCAGTT 2033971 Query 134691 AAAGTTTTAACGAAAATTTGCATTTTG 134717 || ||||| |||||||| ||||||||| Sbjct 2033970 AAGGTTTTGACGAAAATCTGCATTTTG 2033944 >seq3107 Length=1323484 Score = 107 bits (118), Expect = 2e-18 Identities = 337/517 (65%), Gaps = 9/517 (2%) Strand=Plus/Minus Query 7474 GAGCGCGATTACGATTACCGTTATTTTGCCGTAAAAACTTTAAAAAACGGCTACTTGTTG 7533 || ||||||| | ||| |||||||| | |||||| | || ||| ||| | Sbjct 936267 GACCGCGATTTTGGTTATAATTATTTTGGTTTTAAAACTCTTGAACGTTCCTATTTGCTA 936208 Query 7534 AAAATCAACGGCGAATGCGCGGAACGAATTCAACACATGCTGTTGCGCGTGGCGGTGGGC 7593 ||| | || ||| || | || ||| || || ||| | |||| || || | || Sbjct 936207 AAATTAAATGGCAAAATTGTTGAGCGACCACAGCATATGTTAATGCGTGTTGCCATCGGT 936148 Query 7594 ATTCACGGCGAAGACATTGACGCCGCCTTGGAAACGTACCAAATGATGTCTTTGAAAC-- 7651 || || ||||||||||| || || || | ||||| ||| | || | || ||| Sbjct 936147 ATACATGGCGAAGACATAGATGCAGCAATCGAAACATACAACTTGCTTTCC--GAACGTT 936090 Query 7652 AGTTTACGCACGCTTCGCCCACCATGTTTGCCGCGGGCACAAACGCGCCTCAATTGTCCT 7711 | |||||||| ||||| || || | || || || | ||| || ||| |||||||| | Sbjct 936089 ATTTTACGCATGCTTCTCCAACGCTATTCGCTGCTGCCACCAAGCAGCCGCAATTGTCAT 936030 Query 7712 CGTGTTTTTTGCTAACCATGCGCGAAGACAGCATCGACGGCATTTACAACACGCTGCGCG 7771 | || ||| | || |||||| || || ||| || || |||| || || | Sbjct 936029 CATGCTTTCTACTGACCATGGTGGACGATTCCATTGATGGGATTTTCACATCGGCACATC 935970 Query 7772 ATTGCGCCAATATTTCCAAATACGGCGGCGGAATAGGTCTGAACGTAAACGACGTGCGCG 7831 | || || |||||||||| | || || || |||||||||||| | | | || | Sbjct 935969 AATGTGCATTGATTTCCAAATCTGCTGGGGGTATTGGTCTGAACGTACATTGCATACGTG 935910 Query 7832 CCAACGGTAGCCGCA-TCGTGTCCACCAACGGAAAAGCCAGCGGTTTAGAGCCCATGTTG 7890 | || || | | ||| | | | || || || | | | | |||||| | ||| |||||| Sbjct 935909 CAAAAGGCA-CTGCAATTGCGGGTACAAATGGCACATCAAACGGTTTGGTGCCTATGTTG 935851 Query 7891 CGCGTGTTCAATAACGCGGTGCGACATGTAGACCA---GGGGGGAAAGCGCAAAGGCGCC 7947 || ||||||||||| | | || |||| || || || || || || |||||| Sbjct 935850 CGAGTGTTCAATAATGTAGCACGCTATGTGGATCAAGGTGGCGGTAAACGTCCAGGCGCA 935791 Query 7948 GCTGCCATCTATTTGGAGCCGTGGCACGCGGACATTT 7984 ||||||||| |||| || ||||| || || |||| Sbjct 935790 TTTGCCATCTACCTGGAACCATGGCATGCTGATATTT 935754 >seq2605 Length=276952 Score = 104 bits (114), Expect = 2e-17 Identities = 146/200 (73%), Gaps = 4/200 (2%) Strand=Plus/Minus Query 134517 GTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCC 134575 || || || || ||||| || ||||| ||||| | || || || || | || || || Sbjct 242093 GTAGACTCTTTCTGAATATTATAGTCAGCCAATG-TGCGACCATCTTCCAATTGCTTTCC 242035 Query 134576 TGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTT 134635 |||||||| | |||||| ||||| || || || ||||| || ||||||| |||| | | Sbjct 242034 GGCAAAAATTAGACGCTGTTGATCAGGGGGAATTCCTTCCTTATCTTGAA-TTTTGGCCT 241976 Query 134636 GACCGCGTCCAAT-GTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAG 134694 | | || |||| || || || | || || || ||||| ||||| ||||| || | | Sbjct 241975 TAACATGTTCAATAGTATCCGAAGGCTCAACCTCAAGAGTGATGGTCTTACCCGTAAGGG 241916 Query 134695 TTTTAACGAAAATTTGCATT 134714 |||| ||||||||||||||| Sbjct 241915 TTTTTACGAAAATTTGCATT 241896 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505377514411120