Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25] 3,306 sequences; 462,505,359 total letters Query= NC_026927.1 Length=228143 Score E Sequences producing significant alignments: (Bits) Value seq2851 105 1e-17 >seq2851 Length=1548428 Score = 105 bits (116), Expect = 1e-17 Identities = 194/281 (69%), Gaps = 4/281 (1%) Strand=Plus/Minus Query 161417 TATGGATATTGGATTGTAAAGAACTACAGAGAGAGTTATGGGATGCACGCCAGTAGTGGT 161476 || || | ||||||||| | |||||| | || ||| ||| | ||| ||| ||| Sbjct 769474 TACGGCTTTTGGATTGTTATTAACTACCGTGAAGCATATAATATGTATGCCTGTAATGGC 769415 Query 161477 ATTCTATTCAACCATGAGTCACCACGACGGGGTGAGACTTTCGTAACCCGTAAGATTACT 161536 || | ||||| || || || ||||| || ||||| | |||||| || || || || || Sbjct 769414 ATATTGTTCAATCACGAATCCCCACGTCGAGGTGAAAATTTCGTGACACGCAAAATAAC- 769356 Query 161537 AGGGGACTATCCCGTAT-TAGTACAGGA-CTACAGGATTGTCTATACCTAGGTAATCTAA 161594 | | | | || | || | || | | | ||||| | | | | |||||||| Sbjct 769355 -GCGTTCGGTAGCGAAAATATTTCATCAACAATTGGATTCTTTCGAATTGGGTAATCTCG 769297 Query 161595 ACTCAAGACGAGATTGGGGTCATGCTGAAGACTATGTGGAGGCTATGTGGTTGATGTTAC 161654 |||| | ||| ||||||||||| || || || |||||||| |||||| ||||||| | Sbjct 769296 ACTCGAAACGTGATTGGGGTCACGCAATGGATTACGTGGAGGCCATGTGGATGATGTTGC 769237 Query 161655 AACAGGAAACTCCTGATGACTATGTGATTGCCACAGGTAAA 161695 || ||||| |||| ||| | |||||||||||| ||| || Sbjct 769236 AATTGGAAAGACCTGCTGATTTTGTGATTGCCACCGGTGAA 769196 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 729899435659280