Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25]
3,306 sequences; 462,505,359 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq3107 576 2e-159
seq2718 266 4e-66
>seq3107
Length=1323484
Score = 576 bits (638), Expect = 2e-159
Identities = 1248/1853 (67%), Gaps = 32/1853 (2%)
Strand=Plus/Plus
Query 68395 GCGGGTTTTGTACGTAGATAGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAA 68454
|| ||||| ||||| | ||| ||||| || || || |||||| |||| ||| |||||
Sbjct 934448 GCTGGTTTCGTACGCAAATAATACATGCCCGTCTTGAGACCTGCCTTCCAGCCGAAGAAA 934507
Query 68455 TGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTATATGAATATTCATCGATTGACTT 68514
|| ||| || || || ||| | || || || | || || || | ||| ||||||
Sbjct 934508 TGTATAGAAGTAAGCTTACCATAGTTGGGCTCAGCCACGTGTATGTTGAACGACTGACTT 934567
Query 68515 TGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCTTTTGAGG--AATTT 68572
||||||||||| || || | |||||| |||||||| || | | |||| | | ||| |
Sbjct 934568 TGATCGATGAATGCACCGCGATCTGCAGCCATTTTGAT--TGATGTTTTCACGGAAATCT 934625
Query 68573 CCCAAATAGTCTT--AAAAATC---TGTTTGATATCATCTGGAAGGCTCG-TATTTTGAA 68626
|||||| ||| || | | ||| | | || | | | |||| || ||||||| |
Sbjct 934626 CCCAAACAGTTTTGTATAGATCGCGTATGTGCTGTGGTATGGAT---TCAATATTTTGTA 934682
Query 68627 TGGATCCACCATCGGATATAATTATATTCTTGATCTCATCATTCCACAATTTTCTCTCCG 68686
|||| || | | || |||||| ||||||| || ||||||| |||||| ||| |
Sbjct 934683 TGGAGCCGCGACTGGTTATAATATTATTCTTCATATCATCATCCCACAAACCCAACTCGG 934742
Query 68687 TTAAAACTCTAAGGAGATGCGGATTAACTATTTGAAATTCCCCAGATAACACTCTACGAG 68746
||| | | | | | || |||| || | ||||||||| || || | ||| | ||| |
Sbjct 934743 TTAGATCGCGCAACAAGTGATGATTTACAACTTGAAATTCACCTGAAAGCACACGACGTG 934802
Query 68747 TGTAAATATTACTGGTATATGGTTCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTG 68806
| |||||||| || |||||||| | || ||||| || |||| |||||| || ||||
Sbjct 934803 TATAAATATTGGAAGTGTATGGTTCAAATGACTCATTGTTGCCCATAATTTGTGCTGTTG 934862
Query 68807 ATGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCATGTGTTATGATTTTAT 68866
| ||||||||||| || || | || |||| || | | ||||||| | ||||| |
Sbjct 934863 AAGCAGTTGGCATGGGCGCAAGCAGTAAAGAGTTGCGGACACCATGTTGCTTTATTTTCT 934922
Query 68867 CTTTTAGATGTTTCCAATCCCAAAGATCAGATGGTACAACATTCCAAAGATCGTATTGTA 68926
| || | | |||||| ||||||||||| |||| || ||| | || || ||||
Sbjct 934923 CCTTCAATTCGGTCCAATTCCAAAGATCAGTTGGTGTTTTATCCCACATGTCATACTGTA 934982
Query 68927 GAATTCCGTTACTTGCATATGATCCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTA 68986
|||| || ||||| | ||| || | || |||||||| || || | ||| ||||
Sbjct 934983 GAATACCCTTACTAACGGGTGAACCTTCGTAAGTTTCATAGGGGCCAAGTTTTTCGGCTA 935042
Query 68987 GTTCACAACTTGCCTCTAATGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGAT 69046
||| ||||| || || || || || || |||||||||||||| || | || ||| | |
Sbjct 935043 ATTCGCAACTAGCTTCCAAGGCGCCATAGTAAATTGTTTCGAATATTTGCTGATTCAAAA 935102
Query 69047 CTTGTGCTTCTAGACTATCGAATGGATAATGTAAAAGAATAAATGCATCTGCCAATCCCT 69106
| ||||||| ||| ||| |||||||| | | | ||| || || || || || ||||
Sbjct 935103 GTAATGCTTCTTCACTTTCGTATGGATAACGCATTAAAATTAAAGCGTCAGCAAAACCCT 935162
Query 69107 GAACCCCAATACCGATAGGTCTATGTCTCTTATTTGAACTTTC--AGCTTCTGGAATAGG 69164
| || ||||||||||| || | |||||| ||| || |||| || || || | ||
Sbjct 935163 GTACTCCAATACCGATGGGACGATGTCTGAAATTCGA--TTTCCTTGCCTCCGGTAAGGG 935220
Query 69165 ATAATAATTAATATCTATAATTTTATTAAGATTTCGGACTACTACTTTAACCACGTCCTT 69224
||||| |||||| ||||| |||||||| | ||| || || ||| || || ||
Sbjct 935221 ATAATGATTAATGTCTATTATTTTATTCAAATTACGTGTAACGGTTTTGGTGACCTCTTT 935280
Query 69225 TAGTTTGAGAAAATCAAA---TCGTCCATCTATAACAAACATATTCAGTGCTACAGATGC 69281
|| ||| || | | | | | | ||||||||||||| || | || ||
Sbjct 935281 GAGGCGCTTAAAGTCGTACGTTTTTTCGGGTGTGACAAACATATTCAACGCGATTGAAGC 935340
Query 69282 TAGATTACAAACTGCTACCTCATTAGAATTTGCATATTGTATTATCTCTGTACATAGATT 69341
| || || || |||||||||| || || ||||| | || || ||||||| |||
Sbjct 935341 CAAGTTGCACACAGCTACCTCATCAGGTGCTGAATATTCCACAATTTCGGTACATAAATT 935400
Query 69342 ACTACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTA 69401
|||||| || || || || | ||| || |||||||||||| ||||| || || || ||
Sbjct 935401 ACTACACTTAATTGTACCAACATTCTGTTGATTACTCTTTCGATTACAAGCATCTTTATA 935460
Query 69402 AAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCT 69461
| || | || || || || || | || ||||| ||||| | | | || ||| |
Sbjct 935461 CAACATGTATGGTGTGCCGGTCTCCACTTGCGATTCAATAAT-GCTAAACCAAAGACTTT 935519
Query 69462 AGCATTTATTACGGTCTT-GTAACGCTTC--TCTTTTTCATATTGTGTATATAGCCGTTC 69518
|| |||| |||| || | | || || | |||||||| ||||| |||
Sbjct 935520 GTGCTT--TTACTTTCTTATTAGCACGTCCTTCCTGTTCATATTTCAGATATAATTTTTC 935577
Query 69519 GAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCA 69578
||| || || ||||| || |||| | || ||||| | | ||||||||| | |||||
Sbjct 935578 GAACTCTTCACCCCATACTTCATGTAGACCGGGACACTTGTGTGGACACATTAGCGACCA 935637
Query 69579 CACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAG 69638
| |||| | | || ||||||||||||||||| || ||||| | ||| ||| |
Sbjct 935638 GTCTTCATTGGCTTCTACACGTTTCATAAATAGATCAGGTATCCACAAAGCATAAAACAA 935697
Query 69639 ATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAAT 69698
|||||||| | || ||||| || || || ||||| || | ||| | ||| | | |||
Sbjct 935698 ATCTCTGGCGCGATGCTCTTCTTTCCCAGTGTTTTTCTTCAAATCCAAAAATTGGAAAAT 935757
Query 69699 ATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTG 69758
||||| |||||||||||| || || || || | | || || |||||| || || ||
Sbjct 935758 ATCAGCATGCCATGGTTCCAGGTAGATGGCAAATGCGCCTGGACGTTTACCGCCACCTTG 935817
Query 69759 ATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTT 69818
||| | || | || ||||| | |||| || ||| || | | ||| || ||| |
Sbjct 935818 ATCCACATAGCGTGCTACATTATTGAACACTCGCAACATAGGCACCAAACCGTTTGATGT 935877
Query 69819 ACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTAT 69878
|||||||| || | ||| | | ||| |||| || || | | ||||| ||
Sbjct 935878 GCCATTTGTACCCGCAATTGCAGTGCCTTTTGCACGTATGCAATGTACGTTCAGACCAAT 935937
Query 69879 TCCTCCTGCCATTTTAGAGATTAGAGCACA---ACGTTTCAATGTGTCATATATACCCTC 69935
|| || || ||| || || | ||||| | || | ||||| | || || ||
Sbjct 935938 ACCCCCAGCAGATTTGGAAATCAATGCACATTGATGTGCCGATGTG---AAAATCCCATC 935994
Query 69936 TATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCC 69995
||| ||| || | |||| | || ||||| || |||| ||| | || | || |
Sbjct 935995 AATGGAATCGTCCACCATGGTCAGTAGAAAGCATGATGACAATTGCGGCTGCTTGGTGGC 936054
Query 69996 CGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGT 70055
||| |||| || ||||| || || || || | ||| ||||||| ||||||||
Sbjct 936055 AGCAGCGAATAGCGTTGGAGAAGCATGCGTAAAATAACGTTCGGAAAGCAAGTTGTATGT 936114
Query 70056 TTCAATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAACATATG 70115
||| || |||| ||||| || ||| || || || || |||||||| ||||||||
Sbjct 936115 TTCGATTGCTGCATCTATGTCTTCGCCATGTATACCGATGGCAACACGCATTAACATATG 936174
Query 70116 CTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTT 70175
||| ||||| || || |||| ||||| ||| | || || || ||| ||||||||
Sbjct 936175 CTGTGGTCGCTCAACAATTTTGCCATTTAATTTTAGCAAATAGGAACGTTCAAGAGTTTT 936234
Query 70176 AAACCCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACAGAATTTA 70228
||| |||||||| || || ||| || | || |||||||| |||| ||||
Sbjct 936235 AAAACCAAAATAATTATAACCAAAATCGCGGTCATAAATAATGGCAGAGTTTA 936287
Score = 86.0 bits (94), Expect = 9e-12
Identities = 100/135 (74%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 70338 AAATAGtttttttGTTTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAATAGC 70397
||||| |||||| ||||| || || ||||||||||| ||||| | || || | | ||
Sbjct 936498 AAATACTTTTTTAGTTTCTTTATGCAAATTTGATATAGCTATGCGAGCAGCCAATGTTGC 936557
Query 70398 ATAGTCAGGATGTTGTGTAGTACAAGTAGCTGCTATTTCCGCAGCTAACGTATCTAATTC 70457
|||||| | ||||||||| ||| | | || |||||||| ||||| || |||| | ||
Sbjct 936558 ATAGTCGGCATGTTGTGTTGTAAGACTTGCAGCTATTTCAGCAGCCAAGTTATCAAGCTC 936617
Query 70458 TATAGTTGTAACTCC 70472
| || || |||||
Sbjct 936618 TTGTGTGGTGACTCC 936632
>seq2718
Length=1670031
Score = 266 bits (294), Expect = 4e-66
Identities = 489/713 (69%), Gaps = 9/713 (1%)
Strand=Plus/Minus
Query 39442 AATCAATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTAT 39501
|| ||| | ||| || |||||||| || || ||| | || |||||||| || ||
Sbjct 71497 AAGCAAACGATCAGCCACAAATTCGATATAATCGGACATTAGTTTGCAATTCATACCGAT 71438
Query 39502 GAGTTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTAT 39561
|| || || || | ||| || |||| || || | || || | || || || | ||
Sbjct 71437 TAGATTCACCGGCAAAGCGTCAGTTAAGAATTCCTGCTCAATTTTAACAGCTTCAGAAAT 71378
Query 39562 TAT--CGATGTTACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAACATTAAGCAG 39619
||| | | ||| ||||| ||| ||| || | |||||||| ||||| || ||
Sbjct 71377 TATTTCAACAATACG--CTCATTACTTGGTTTTTGTATTAAATGTTGGAACATCAAACAT 71320
Query 39620 GCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCA 39679
|||||||||||||| || |||||||||| ||||| ||| || |||||||| | ||
Sbjct 71319 GCGAAGTCACAATGAAGTCCCTCATCTCGTGAAATTAGTTCATTGGAAAATGTCAAGCCT 71260
Query 39680 GGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATG 39739
||||||| |||||| || || ||||| || || | ||||||| ||| ||||| ||
Sbjct 71259 GGCATTAAACCACGTTTCTTAAGCCAGAAGATCGAAGCAAAACTGCCACTGAAGAAAATA 71200
Query 39740 CCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTATGTA----T 39795
||||| || || |||||||||| | | || || || ||| | | | | |
Sbjct 71199 CCTTCAACGGCAGCAAATGCAATTACACGTTCACCA-AAGTTGGCCGACTTCGAAGAAAT 71141
Query 39796 CCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAA 39855
||| | |||||||| || || |||||| ||||||||| ||||||||||| ||
Sbjct 71140 CCAAGCAAGCGCCCAATCTGCCTTACGCTTTACGGCAGGCATTGTCTCTATAGCATTGAA 71081
Query 39856 GAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTC 39915
| ||| ||| | || |||| ||||||||| ||||| | |||||||||||
Sbjct 71080 TAAGCAATTCCTTTGTTTCGAGTCCTTAATATATGTATCAATTAATATGCTATACATTTC 71021
Query 39916 TGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTG 39975
||||| | || || ||||| || |||||||| || || || | ||| || || | |||
Sbjct 71020 AGAATGCACATTCTCCATCGCAATTTGAAATCCATAGAAGCAACGTGCCTCTGTCACTTG 70961
Query 39976 TACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAA 40035
|| || || || | ||| | | |||||||||||| || |||||| ||||| ||
Sbjct 70960 GACTTCCTGGCAGAAGCGTTCAACTACATTTTCATTCACAATACCATCAGATGCGGCGAA 70901
Query 40036 AAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAATTTATTCCAGTCATT 40095
||| || || || || |||||||| | ||||| || | ||| ||||
Sbjct 70900 AAAGGCTAACACGTGGGAAATAAAATGTCGTTCATTATCAGTGAGGCGTGCCCAATCATC 70841
Query 40096 GATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCT 40148
|||||||| || | ||||||||| || ||||||| ||||| || |||||||
Sbjct 70840 CATATCTTTAGAAAGATCTACTTCCTCTACTGTCCAGAACGATGCTTCTGCCT 70788
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686880413493840
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