Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25] 3,306 sequences; 462,505,359 total letters Query= NC_027916.2 Length=160358 Score E Sequences producing significant alignments: (Bits) Value seq314 109 6e-19 >seq314 Length=932230 Score = 109 bits (120), Expect = 6e-19 Identities = 181/254 (71%), Gaps = 8/254 (3%) Strand=Plus/Plus Query 31154 CTTCGATGTGATTGACATAAATATGCGCATCGCCAATAGAGTGTACCAATTCCCCTGGTC 31213 |||| || ||||| ||| | ||| |||||||| | || ||| || || |||||||||| Sbjct 384069 CTTCAATATGATTATTATAGACATGTGCATCGCCCAAAGTGTGGACGAAATCCCCTGGTC 384128 Query 31214 TTAGATGGGTCAATTTG-GCAATCACAT--GAACCAAAAGCGCATAACTCGCTATGTTGA 31270 |||| || ||| || ||||||| || | | |||||| | | || || || | Sbjct 384129 GGAGATCAGT-AATATGAGCAATCATATAGGTAAGCAAAGCGTACGAG--GCAATATTAA 384185 Query 31271 ATGGTACACCCAATCCCAAATCGGCAGATCGTTGATATAACAAACAGGAAAGTTCATCTC 31330 |||||||||||||||||| ||||||| ||||| ||||| ||| || | || | Sbjct 384186 ATGGTACACCCAATCCCATATCGGCACTGCGTTGGTATAATTGACAAGATAACTCTCCAT 384245 Query 31331 CGGTCACGTAAAATTG-AAATAACACATGACAAGGCGGCAAAGCCATTTCACAGGTATCG 31389 || || ||||||| | ||| ||||||||| || | ||||||| | | ||||| Sbjct 384246 TGGCAACAAAAAATTGTGCAAGACA-ATGACAAGGTGGTAGCGCCATTTGAGGGATATCG 384304 Query 31390 ACGGGATTCCAAGC 31403 || ||||||||||| Sbjct 384305 ACAGGATTCCAAGC 384318 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 512996399547680