Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25]
3,306 sequences; 462,505,359 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq3107 324 1e-83
seq603 107 2e-18
seq2605 104 2e-17
seq1558 86.0 5e-12
>seq3107
Length=1323484
Score = 324 bits (358), Expect = 1e-83
Identities = 1031/1579 (65%), Gaps = 45/1579 (3%)
Strand=Plus/Plus
Query 130403 CTGTTTTCGACGGTGAATTGAATGGCATTGGTGGCCGGCTTGGTGCGCAAATAATACATG 130462
|| || || || || ||||| || ||||| | || || || || |||||||||||||||
Sbjct 934415 CTTTTATCCACAGTAAATTGTATAGCATTTGCAGCTGGTTTCGTACGCAAATAATACATG 934474
Query 130463 CCTGTTTTGAGTCCAATTTTGTGTCC--ATAATTGTGGATGCTGCACATTGTTTGGTAAT 130520
|| || ||||| || || || | || ||| | | | | | | || |
Sbjct 934475 CCCGTCTTGAGACCTGCCTTCCAGCCGAAGAAATGTATA-GAAGTAAGCT-TACCATAGT 934532
Query 130521 TGGGTTGCGCCACGAATATGTTGAGCGATTGCGATTGATCAATAAAAGCGCCCCTGTCTG 130580
|||| | |||||| |||||||| ||| || |||||| || || || || | ||||
Sbjct 934533 TGGGCTCAGCCACGTGTATGTTGAACGACTGACTTTGATCGATGAATGCACCGCGATCTG 934592
Query 130581 CAGCCATGTCGAGCATGGTTTTATTTTTCATCTCCCAAGCGGTCTTGTATAGATCCCTAA 130640
||||||| | || ||||| ||||||||| | || ||||||||||| | |
Sbjct 934593 CAGCCATTTTGATTGATGTTTTCACGGAAATCTCCCAAACAGTTTTGTATAGATCGCGTA 934652
Query 130641 TGTGTTTGGGTATGCGCGCAATCGATTGAACGCTACCGTTGTTGGCTATAATTTCGTTGC 130700
|||| | |||||| |||| ||| | | ||| ||| |||||| | ||
Sbjct 934653 TGTGCTGTGGTATGGATTCAATATTTTGTATGGAGCCGCGACTGGTTATAATATTATTCT 934712
Query 130701 GCATACTTTTATCGTACAATCCAAGCTGTACAAGATCTTTTACCAAATGATTATTAATGA 130760
|||| | ||| |||| || | || ||||| | ||| |||| ||| | |
Sbjct 934713 TCATATCATCATCCCACAAACCCAACTCGGTTAGATCGCGCAACAAGTGATGATTTACAA 934772
Query 130761 TTTGAAAATCACCAGCCAGGACGCGTCTAACGTAAATGTTGCTCGTGAACGGTTCAAAGG 130820
|||||| ||||| | || || || | ||||| ||| ||| | |||||||| |
Sbjct 934773 CTTGAAATTCACCTGAAAGCACACGACGTGTATAAATATTGGAAGTGTATGGTTCAAATG 934832
Query 130821 ATTCGTTGTTGCCGAATATTTGTGCTGTAGTTGCGGTGGGCATGTATGCCACTAATAGAG 130880
| || |||||||| | ||||||||||| | || || |||||| || | | || ||
Sbjct 934833 ACTCATTGTTGCCCATAATTTGTGCTGTTGAAGCAGTTGGCATGGGCGCAAGCAGTAAAG 934892
Query 130881 AATTACGAAGACCGTGCGTCGTGATTTTTCGCTTCAATTCATCCCAATCCCATAGAGAGG 130940
| || || | ||| || | | ||||| ||||||||| ||||| ||| ||| |
Sbjct 934893 AGTTGCGGACACCATGTTGCTTTATTTTCTCCTTCAATTCGGTCCAATTCCAAAGATCAG 934952
Query 130941 TAGGTTTGACATTGTTCCACATATCAAATTGTAGTATGCCTTTACTGGCGGGACTGGA-- 130998
| ||| | || | |||||| ||| | ||||| || || ||||| |||| || |
Sbjct 934953 TTGGTGTT---TTATCCCACATGTCATACTGTAGAATACCCTTACTAACGGG--TGAACC 935007
Query 130999 TTCGAACGATTCGTAGATTCC------TTCGACACGAGCCAGGTCGTTGCTAGCTTCCAA 131052
|||| | | ||| ||| || |||| || | ||| |||||||||||
Sbjct 935008 TTCGTAAGTTTCATAGGGGCCAAGTTTTTCG------GCTAATTCGCAACTAGCTTCCAA 935061
Query 131053 AGCTCCGTAATAAATGGTTTCGGCAATTTGTTTATTTAATTGTTTCGCTTGGTTGCTCTC 131112
|| || || ||||| |||||| ||||| | ||| || || |||| | || ||
Sbjct 935062 GGCGCCATAGTAAATTGTTTCGAATATTTGCTGATTCAAAAGTAATGCTTCTTCACTTTC 935121
Query 131113 GTAAGGAAATTTCATTAAAATAAAAGCGTCTGCGAGACCCTGTATCCCAACGCCCACCGG 131172
||| ||| | ||||||||| |||||||| || | |||||||| |||| || | ||
Sbjct 935122 GTATGGATAACGCATTAAAATTAAAGCGTCAGCAAAACCCTGTACTCCAATACCGATGGG 935181
Query 131173 TCTATGTTTTAAATTACATTTACGCGAACATTCGGT--GGGATAAAGGTTAATGTCAATT 131230
| |||| | ||||| |||| | | | | |||| ||||||| | |||||||| |||
Sbjct 935182 ACGATGTCTGAAATTCGATTTCCTTG--CCTCCGGTAAGGGATAATGATTAATGTCTATT 935239
Query 131231 ATTTTGTTTAAATTGCGCACTACAATTTGTGTGACGCTTTTCAATTTGTCGAAATCAAAC 131290
||||| || ||||| || || ||| ||||| ||| | | || || ||
Sbjct 935240 ATTTTATTCAAATTACGTGTAACGGTTTTGGTGACCTCTTTGAGGCGCTTAAAGTCGTAC 935299
Query 131291 GTGCCAGTTTCGAGGTTTACAAATTGATTTACACATATTGACGCCAGATTACAAACTGCC 131350
|| ||||| | | ||||| ||| | ||||| |||| || || || ||
Sbjct 935300 GTTT---TTTCGGGTGTGACAAACATATTCAACGCGATTGAAGCCAAGTTGCACACAGCT 935356
Query 131351 GTTTCGTCATAATCGCAATACTGAACAATTTCGGCGCACAAATTACTGCTCTTTATGGTG 131410
|| ||| | |||| | |||||||||| || |||||||| | ||| || ||
Sbjct 935357 ACCTCATCAGGTGCTGAATATTCCACAATTTCGGTACATAAATTACTACACTTAATTGTA 935416
Query 131411 CCCAAATTTTGTTGATTGCTTTTAGCATTCACATGG-TCCTTGTACATCATGTAGGGCGT 131469
|| | ||| |||||||| || || ||| ||| | || || |||| |||||| || ||
Sbjct 935417 CCAACATTCTGTTGATTACTCTTTCGATT-ACAAGCATCTTTATACAACATGTATGGTGT 935475
Query 131470 GCCCGTTTCGACTTGAGTTTCAATAATGT--ATCGAAAGAGTTTTCGAGCAGACAATTGA 131527
||| || || ||||| | |||||||||| | | ||||| ||| | || ||
Sbjct 935476 GCCGGTCTCCACTTGCGATTCAATAATGCTAAACCAAAGACTTTGTGCTTTTACT-TTCT 935534
Query 131528 TATTTGTATTGGCCGCGTTTTTCGTAATTTTCGTACAACGTTTCAAAGTTTTGGCC--AA 131585
|||| | | | || | ||| || || || || |||| || | || || |
Sbjct 935535 TATTAGCAC-GTCCTTCCTGTTCATATTTCAGATATAATTTTTCGAACTCTTCACCCCAT 935593
Query 131586 ACGAACTGTCCAAATTGGGACATTCGCTGGGACACATTAGCGACCACACGCCGTTCTGTT 131645
|| ||| | | |||||| | | ||||||||||||||||| | | || ||
Sbjct 935594 ACTTCATGT--AGACCGGGACACTTGTGTGGACACATTAGCGACCAGTCTTCATTGGCTT 935651
Query 131646 CAACTCGCTTCATAAACAAATCCGGCACCCATAACGCGTACAACAGATCTCTAGCTTTTT 131705
| || || |||||||| | ||| || | ||| || || || |||| |||||| || |
Sbjct 935652 CTACACGTTTCATAAATAGATCAGGTATCCACAAAGCATAAAACAAATCTCTGGCGCGAT 935711
Query 131706 TCTCTTCTGTACCCATAAtttttttCAAATTTAAAAAGTCCAAAATGTCCGCATGCCAGG 131765
||||||| | || | |||| ||||||| ||||| | ||||| || |||||||| |
Sbjct 935712 GCTCTTCTTTCCCAGTGTTTTTCTTCAAATCCAAAAATTGGAAAATATCAGCATGCCATG 935771
Query 131766 GTTCCAAATACACTGCCATTGCGCCTTTGCGCTTACCG---CCTTGATTAACATGACGAA 131822
|||||| || | || | ||||||| || |||||| ||||||| |||| ||
Sbjct 935772 GTTCCAGGTAGATGGCAAATGCGCCTGGACGTTTACCGCCACCTTGATCCACATAGCGTG 935831
Query 131823 CCATGTTGTTGTATACGCGCAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCT 131882
| | || ||| | || |||||||| ||| |||||||||| | | ||||| || | |
Sbjct 935832 CTACATTATTGAACACTCGCAACATAGGCACCAAACCGTTTGATGTGCCATTTGTACCCG 935891
Query 131883 TAA-TGTAGCTGCCATTGGCTCTGATTTTGTGAACGTTGAGTCCAATACCTCCGCCGTAT 131941
|| || || |||| || || | || || ||||| || |||||||| || | ||
Sbjct 935892 CAATTGCAG-TGCCTTTTGCACGTATGCAATGTACGTTCAGACCAATACCCCCAGCAGAT 935950
Query 131942 TTAGAGATTAGTGCGCATT 131960
|| || || | ||| ||||
Sbjct 935951 TTGGAAATCAATGCACATT 935969
>seq603
Length=780983
Score = 107 bits (118), Expect = 2e-18
Identities = 149/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098
|||||||| | ||||| || || || || ||||| ||| || |||| |||||||
Sbjct 745778 ACCAAATGAAGTGTAGACTCCTTCTGGATGTTGTAATCGGACAGAGTGCGTCCGTCTTCC 745719
Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158
|| ||||||||||| | || | ||| |||||||| || || | || ||||| ||
Sbjct 745718 AGTTGTTTACCGGCAAAGATTAAACGTTGTTGATCTGGGGGGATTCCTTCTTTGTCTTGA 745659
Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218
||||| ||| | |||| | ||| || | | |||||| || ||||| || | |||
Sbjct 745658 ATCTTAGCTTTAACATTTTCAATAGTATCGGATGGTTCAACCTCCAGAGTGATGGTCTTG 745599
Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
|| |||| || ||||| |||||||||||
Sbjct 745598 CCAGTCAAGGTCTTCACGAAGATTTGCAT 745570
Score = 93.3 bits (102), Expect = 4e-14
Identities = 158/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 27020 GCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCT 27079
||||||||| | || | |||||||| | || || || || || ||||||||||||
Sbjct 747780 GCCTCCGCGAAGACGTAGCACCAAATGGAGTGTCGATTCCTTCTGTATATTGTAGTCGGA 747721
Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139
|| | || | || || || || || ||||| |||| | ||| |||||||| || ||
Sbjct 747720 CAAAGTACGTCCATCCTCAAGTTGCTTGCCGGCAAAAATCAAACGTTGTTGATCTGGTGG 747661
Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199
| || |||||||| |||||| || | | || | || |||| || || ||
Sbjct 747660 AATGCCTTCTTTATCTTGGATCTTAGCCTTAACATTCTCAATGGTATCTGAGGGCTCGAC 747601
Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
||| | || || | |||||| || || || || || ||||||||||||
Sbjct 747600 TTCCAAGGTGATGGTTTTGCCAGTGAGGGTCTTAACGAAGATTTGCATA 747552
>seq2605
Length=276952
Score = 104 bits (114), Expect = 2e-17
Identities = 168/238 (71%), Gaps = 4/238 (2%)
Strand=Plus/Minus
Query 27038 TACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTCGTCTT 27096
||| ||||| || ||||| ||||| |||||||| ||||| || |||| ||| | ||||
Sbjct 242106 TACTAAATGCAATGTAGACTCTTTCTGAATATTATAGTCAGCCAATGT-GCGACCATCTT 242048
Query 27097 CGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGG 27156
| | || || ||||| |||| |||||||||||||| || || | || || |||||
Sbjct 242047 CCAATTGCTTTCCGGCAAAAATTAGACGCTGTTGATCAGGGGGAATTCCTTCCTTATCTT 241988
Query 27157 CGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATT 27216
|| ||| || | ||| | ||| || | | ||||| || ||||| || | |
Sbjct 241987 GAATTTTGGCCTTAACATGTTCAATAGTATCCGAAGGCTCAACCTCAAGAGTGATGGTCT 241928
Query 27217 TGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGCTAAAAATTTATTAAACCTTAT 27274
| ||||| || ||||| || || |||||||| |||| || ||| | |||||| ||
Sbjct 241927 TACCCGTAAGGGTTTTTACGAAAATTTGCATTGCTG--AACAATCTTACAAACCTAAT 241872
>seq1558
Length=2163639
Score = 86.0 bits (94), Expect = 5e-12
Identities = 148/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092
|||| |||||||| | || || || ||||| || ||||||||| || | |||| |
Sbjct 2034162 CGCAGAACCAAATGGAGGGTTGACTCCTTTTGGATGTTGTAGTCGGACAAGGTGCGACCA 2034103
Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152
||||| | || || |||||| | || | |||||||||||| || || | |||||||||
Sbjct 2034102 TCTTCCAATTGCTTTCCGGCGAAGATCAAACGCTGTTGATCTGGGGGGATGCCCTCTTTA 2034043
Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212
|| ||| || ||| | |||| | ||||| | | || || |||| || ||
Sbjct 2034042 TCTTGGATTTTAGCTTTGACATTTTCGATGGTGTCAGAAGGCTCGACCTCTAAGGTAATG 2033983
Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
| || || || | ||||| || || || |||||
Sbjct 2033982 GTCTTACCAGTTAAGGTTTTGACGAAAATCTGCAT 2033948
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424917278596272
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