Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25] 3,306 sequences; 462,505,359 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq1113 91.5 2e-13 >seq1113 Length=4665328 Score = 91.5 bits (100), Expect = 2e-13 Identities = 127/178 (71%), Gaps = 0/178 (0%) Strand=Plus/Minus Query 179064 ATCTTTGCCACCCATGAGACGCGTCCCAAATTGACCACATGGCTCAAGGAGATTGATATT 179123 |||||| |||||| ||||| || || |||||||||| ||||| | | ||| ||||| Sbjct 2123000 ATCTTTACCACCCTGCAGACGTGTACCGAATTGACCACGAGGCTCCAATAAATTAATATT 2122941 Query 179124 GTTTGAACCCATGTAGTCATTGGCCAACTTGACAATCGTATCCGCGAGGGAGACTTCACC 179183 ||||| || | ||| | | ||||| ||||| || ||| || | || | ||||| Sbjct 2122940 ATTTGATCCTACGTAATTTTGCGCCAAATTGACTATGGTAGCCTGCAATGACATCTCACC 2122881 Query 179184 GTGATGGTAAGCCGACTTGTCCGCCACATATGCCGCCAACTGCGCCACCTTCATCTCA 179241 ||||||||| || ||| | || ||||| | | | ||| || || || |||| |||| Sbjct 2122880 GTGATGGTAGGCGGACATTTCAGCCACTGAACCAGACAATTGGGCAACTTTCACCTCA 2122823 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618409643165360