Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25]
3,306 sequences; 462,505,359 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq3107 109 6e-19
>seq3107
Length=1323484
Score = 109 bits (120), Expect = 6e-19
Identities = 545/860 (63%), Gaps = 21/860 (2%)
Strand=Plus/Minus
Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281
|||||| | ||||| ||||| || ||||||||||| ||||| |||||||| ||| | |
Sbjct 936180 CCACAGCATATGTTAATGCGTGTTGCCATCGGTATACATGGCGAAGACATAGATGCAGCA 936121
Query 104282 TTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTTC 104341
| || |||||| || | | ||| || || || | || || | ||||| || |||
Sbjct 936120 ATCGAAACATACAACTTGCTTTCCGAACGTTATTTTACGCATGCTTCTCCAACGCTATTC 936061
Query 104342 AATGCTGGTACACCAAGA--CCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 104399
||||| ||||||| || ||| |||| ||||| || | ||| ||| |
Sbjct 936060 GCTGCTGC--CACCAAGCAGCCGCAATTGTCATCATGCTTTCTACTGACCATGGTGGACG 936003
Query 104400 ACTCAATCAACGGTATCT----AT-GGAAC-TCTTACGGAGTGTGCGCAAATCTCAAAGT 104453
| || || | || || | || || || || | ||||| || || || |
Sbjct 936002 ATTCCATTGATGGGATTTTCACATCGGCACATC------AATGTGCATTGATTTCCAAAT 935949
Query 104454 GGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGG 104513
|||||||||||||| || || | ||| | | || || || ||| ||
Sbjct 935948 CTGCTGGGGGTATTGGTCTGAACGTACATTGCATACGTGCAAAAGGCACTGCAATTGCGG 935889
Query 104514 GGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGC 104573
| |||||||| |||| | ||| | | || ||| | || || || || ||| |
Sbjct 935888 GTACAAATGGCACATCAAACGGTTTGGTGCCTATGTTGCGAGTGTTCAATAATGTAGCAC 935829
Query 104574 GCTATGTAAATCAAGCTGGGCGT---CGAAAGGGATCTATCGCAGTCTATCTTGAGCCAT 104630
||||||| |||||| ||| || || || | | || |||| || || ||||
Sbjct 935828 GCTATGTGGATCAAGGTGGCGGTAAACGTCCAGGCGCATTTGCCATCTACCTGGAACCAT 935769
Query 104631 GGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGC 104690
|||| || ||||| | | || | || ||| ||| || | || ||| |
Sbjct 935768 GGCATGCTGATATTTTCCAATTTTTGGATTTGAAGAAAAACACTGGGAAAGAAGAGCATC 935709
Query 104691 GGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGG 104750
| | | ||| | || | ||| | ||||| || ||||| || ||||| | || || |
Sbjct 935708 GCGCCAGAGATTTGTTTTATGCTTTGTGGATACCTGATCTATTTATGAAACGTGTAGAAG 935649
Query 104751 AGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGG 104810
| || | ||||| || | |||||| ||||| || ||||| || | ||
Sbjct 935648 CCAATGAAGACTGGTCGCTAATGTGTCCACACAAGTGTCCCGGTCTACATGAAGTATGGG 935589
Query 104811 GTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGG 104870
|||| ||||| ||| | || || || || | ||||| || || | | || |
Sbjct 935588 GTGAAGAGTTCGAAAAATTATATCTGAAATATGAACAGGAAGGACGTGCTAATAAGAAAG 935529
Query 104871 TGCCAGCTGCCGATGTGTGGAA-AGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCA 104929
| ||| | | ||| ||| ||| | | || ||| ||||| || ||||||
Sbjct 935528 TAAAAGCACAAAGTCTTTGGTTTAGC-ATTATTGAATCGCAAGTGGAGACCGGCACACCA 935470
Query 104930 TACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATC 104989
|||||| | || ||||| || ||||| | ||||||||||||| ||||| | ||| ||
Sbjct 935469 TACATGTTGTATAAAGATGCTTGTAATCGAAAGAGTAATCAACAGAATGTTGGTACAATT 935410
Query 104990 AAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTG 105049
||| || ||| | ||||| ||||| |||||| | ||| |||||| ||||||
Sbjct 935409 AAGTGTAGTAATTTATGTACCGAAATTGTGGAATATTCAGCACCTGATGAGGTAGCTGTG 935350
Query 105050 TGTAACCTCGCATCAATCGC 105069
|| ||| | || ||||||||
Sbjct 935349 TGCAACTTGGCTTCAATCGC 935330
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583236696747440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |