Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25]
3,306 sequences; 462,505,359 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq1558 167 2e-36
seq603 167 2e-36
seq2707 125 6e-24
seq2605 120 3e-22
>seq1558
Length=2163639
Score = 167 bits (184), Expect = 2e-36
Identities = 175/230 (76%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || ||||| | || || ||| | ||||| | || || || || ||
Sbjct 2033948 ATGCAGATTTTCGTCAAAACCTTAACTGGTAAGACCATTACCTTAGAGGTCGAGCCTTCT 2034007
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | |||||| ||||| ||||| ||||| ||||| || || ||||||
Sbjct 2034008 GACACCATCGAAAATGTCAAAGCTAAAATCCAAGATAAAGAGGGCATCCCCCCAGATCAA 2034067
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||||| || | |||||| || ||||||||||| || ||| | ||||| ||||||
Sbjct 2034068 CAGCGTTTGATCTTCGCCGGAAAGCAATTGGAAGATGGTCGCACCTTGTCCGACTACAAC 2034127
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| ||||||||||| ||| | ||||||||| ||||| | || ||||| ||
Sbjct 2034128 ATCCAAAAGGAGTCAACCCTCCATTTGGTTCTGCGTCTTCGTGGTGGTAT 2034177
>seq603
Length=780983
Score = 167 bits (184), Expect = 2e-36
Identities = 175/230 (76%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || || || || || |||| |||||| | || ||||| || || ||||| |||
Sbjct 745570 ATGCAAATCTTCGTGAAGACCTTGACTGGCAAGACCATCACTCTGGAGGTTGAACCATCC 745629
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | ||||| | || ||| || ||||||||||||||||| || || || ||||||
Sbjct 745630 GATACTATTGAAAATGTTAAAGCTAAGATTCAAGACAAAGAAGGAATCCCCCCAGATCAA 745689
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| |||||||| | ||||| |||||| |||||||| | || | ||||||||||||
Sbjct 745690 CAACGTTTAATCTTTGCCGGTAAACAACTGGAAGACGGACGCACTCTGTCCGATTACAAC 745749
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || |||||||| || | ||||||||| | ||| | || ||||||||
Sbjct 745750 ATCCAGAAGGAGTCTACACTTCATTTGGTTCTTCGTCTACGTGGTGGCAT 745799
Score = 141 bits (156), Expect = 8e-29
Identities = 170/231 (74%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| || || |||||| |||| || || | || ||| | || || || || ||
Sbjct 745797 CATGCAGATTTTCGTCAAAACTTTGACGGGAAAAACCATCACTTTGGAGGTTGAGCCTTC 745856
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
||| | ||||||| |||||| ||||||||||| || ||||| || || || |||||
Sbjct 745857 CGATACCATTGAGAATGTCAAAGCTAAAATTCAAGATAAGGAAGGAATCCCCCCAGATCA 745916
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
||| ||||| || | ||| |||||||| ||||| || | || | ||||| || ||
Sbjct 745917 ACAACGTTTGATTTTCGCTGGCAAACAGTTGGAGGATGGACGCACACTGTCCGACTATAA 745976
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||| ||||| || || ||||||| ||| | || || || ||||| ||
Sbjct 745977 TATTCAGAAGGAATCCACTCTACATTTAGTTCTACGCTTACGTGGTGGTAT 746027
Score = 131 bits (144), Expect = 1e-25
Identities = 158/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 27003 AAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATG 27062
|| || || || ||||| | || || | ||||| || || || ||| | |||||||
Sbjct 747340 AAGACCCTCACTGGCAAAACCATCACCTTGGAAGTTGAGCCATCTGACACCATTGAGAAT 747399
Query 27063 GTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATAC 27122
|||||| ||||| ||||| || ||||| || ||||| |||||||| ||||| || |
Sbjct 747400 GTCAAAGCCAAAATCCAAGATAAGGAAGGAATCCCACCAGATCAACAACGTTTGATTTTT 747459
Query 27123 GCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCG 27182
|||||||| |||||||| || | ||| | ||||| ||||||||||| ||||| ||
Sbjct 747460 GCCGGCAAGCAATTGGAGGATGGACGTACCTTGTCCGACTACAACATTCAGAAGGAATCA 747519
Query 27183 ACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||| | || || || | || ||||| ||||| ||
Sbjct 747520 ACCCTCCACTTAGTCCTTCGCTTGCGTGGTGGTAT 747554
Score = 109 bits (120), Expect = 5e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || || || || || || || ||||| | || || | ||||| || || ||
Sbjct 747553 ATGCAAATCTTCGTTAAGACCCTCACTGGCAAAACCATCACCTTGGAAGTCGAGCCCTCA 747612
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | ||||||| || || || || ||||| ||||||||||| ||||| ||||||
Sbjct 747613 GATACCATTGAGAATGTTAAGGCTAAGATCCAAGATAAAGAAGGCATTCCACCAGATCAA 747672
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| ||||| || | |||||||| ||| | || || | || | ||||| |||||
Sbjct 747673 CAACGTTTGATTTTTGCCGGCAAGCAACTTGAGGATGGACGTACTTTGTCCGACTACAAT 747732
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215
|| || ||||| ||||| | |||||||| | ||| | || || |||
Sbjct 747733 ATACAGAAGGAATCGACACTCCATTTGGTGCTACGTCTTCGCGGAGGC 747780
>seq2707
Length=1765650
Score = 125 bits (138), Expect = 6e-24
Identities = 134/177 (76%), Gaps = 0/177 (0%)
Strand=Plus/Plus
Query 135476 TGGAACGCGGCACAACGGCAGCTTAAGCGAGAAGGCAAAATGCACGGATTTATGCGCATG 135535
|||||||| || || | |||| | | |||||||||||||| || ||| |||| |||
Sbjct 1303237 TGGAACGCAGCGCAGCTGCAGTTGTTACATGAAGGCAAAATGCATGGTTTTCTGCGTATG 1303296
Query 135536 TATTGGGCAAAAAAGATATTGGAATGGTCTGCATCGCCTGCAGAGGCGCTACAACACGCA 135595
|||||||||||||||||| |||| |||||| | |||||| | || || || |||
Sbjct 1303297 TATTGGGCAAAAAAGATACTGGAGTGGTCTTCTACGCCTGATGCTGCTTTAGAAACAGCA 1303356
Query 135596 ATATTTTTTAATGATTACTACAGTTTAGATGGACGCGATTCAAATGGCTACGTAGGT 135652
|| ||||| |||||| | |||||||||||||| ||| |||| || || || |||
Sbjct 1303357 ATTTTTTTGAATGATAAATACAGTTTAGATGGTTTAGATCCAAACGGATATGTTGGT 1303413
Score = 118 bits (130), Expect = 9e-22
Identities = 116/150 (77%), Gaps = 0/150 (0%)
Strand=Plus/Plus
Query 135503 CGAGAAGGCAAAATGCACGGATTTATGCGCATGTATTGGGCAAAAAAGATATTGGAATGG 135562
|| ||||||||||||||||||||| | || | ||||||||| ||||||||| ||||||||
Sbjct 1307132 CGTGAAGGCAAAATGCACGGATTTCTTCGTAAGTATTGGGCTAAAAAGATACTGGAATGG 1307191
Query 135563 TCTGCATCGCCTGCAGAGGCGCTACAACACGCAATATTTTTTAATGATTACTACAGTTTA 135622
|| || || | |||||||||| || ||||| | ||| || || | || ||||||
Sbjct 1307192 TCCAACTCACCAGAAGAGGCGCTAGAAATTGCAATTTATTTAAACGACAAATATAGTTTA 1307251
Query 135623 GATGGACGCGATTCAAATGGCTACGTAGGT 135652
||||| | ||||| || || || || |||
Sbjct 1307252 GATGGCAGAGATTCCAACGGTTATGTGGGT 1307281
>seq2605
Length=276952
Score = 120 bits (132), Expect = 3e-22
Identities = 165/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 26985 GCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCG 27044
|| ||||| || || |||||||| || || || ||| | || |||||||| || || ||
Sbjct 241894 GCAATGCAAATTTTCGTAAAAACCCTTACGGGTAAGACCATCACTCTTGAGGTTGAGCCT 241953
Query 27045 TCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGAT 27104
|| || | ||||| || || ||||||||||| || ||||| || || || |||
Sbjct 241954 TCGGATACTATTGAACATGTTAAGGCCAAAATTCAAGATAAGGAAGGAATTCCCCCTGAT 242013
Query 27105 CAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTAC 27164
||||||||| |||| | ||||| || ||||||||||| || || | | || ||
Sbjct 242014 CAACAGCGTCTAATTTTTGCCGGAAAGCAATTGGAAGATGGTCGCACATTGGCTGACTAT 242073
Query 27165 AACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215
|| ||||| || ||||| || || ||||| || | ||| | | ||||||
Sbjct 242074 AATATTCAGAAAGAGTCTACATTGCATTTAGTACTTCGTCTTAGAGGTGGC 242124
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434900426997120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |