Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25] 3,306 sequences; 462,505,359 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq314 98.7 8e-16 >seq314 Length=932230 Score = 98.7 bits (108), Expect = 8e-16 Identities = 271/409 (66%), Gaps = 10/409 (2%) Strand=Plus/Plus Query 118474 TCAATGTGATTCATATAGACATGAGCATCCCCAATTGTATGTATGAATTCACCAGGTGTA 118533 ||||| ||||| |||||||||| ||||| || | || || | ||| || || ||| Sbjct 384071 TCAATATGATTATTATAGACATGTGCATCGCCCAAAGTGTGGACGAAATCCCCTGGTCGG 384130 Query 118534 AGCCCTGTCAGGTGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAGGA 118593 || | || | ||||||||||| || || | |||| ||| ||| | |||||| || Sbjct 384131 AGATCAGTAATATGAGCAATCATATAGGTAAGCAAAGCGTACGAGGCAATATTAAATGGT 384190 Query 118594 ACACCCAGACCCATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCCCCGTTTGCA 118653 ||||||| ||||| || || | ||||| ||||| ||||| | ||| || || ||| Sbjct 384191 ACACCCAATCCCATATCGGCACTGCGTTGGTATAATTGACAAGATAACTCTCCATTGGCA 384250 Query 118654 ACATAAAACTGACTTATGATGTGACATGGAGGCAGAACCATGGAACTCAGTTGGGCAGGA 118713 ||| |||| || | ||||| || || || |||| | | | | ||||| Sbjct 384251 ACAAAAAATTGTGCAAGACAATGACAAGGTGGTAGCGCCATTTGAGGGATATCGACAGGA 384310 Query 118714 TTCCAGGCTG---TTAAAACATGCCTTCTGCTATATGG-TTCTACCTGTATACCCTCAAT 118769 ||||| || | ||| || | | || || ||| || | ||| ||| ||||| Sbjct 384311 TTCCAAGCAGACATTATAATA---CGTCGATCATTTGGATTATTTCTG-ATAGTGTCAAT 384366 Query 118770 TAAATTCTGAATCTGATCCACACCCTTTCCAGTAT-ACTGAGACTCGCATCCTTTATATT 118828 || | ||||| ||||| | ||||| | | | |||| || ||| | | || | Sbjct 384367 TACTTGCTGAAGTTGATCTATACCCTCATCTTTGTAACTG-TCCTTGCAGTTTCTGTACT 384425 Query 118829 CTGCCCCAAAAAATCTCCATTGAAAACCATAAACAGGCCCCAGATCTCC 118877 ||||||||| | ||| |||||||||||||| || || ||||| || Sbjct 384426 TGGCCCCAAAATGACGCCACTGAAAACCATAAACTGGGCCTAGATCACC 384474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414460099952584