Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25]
3,306 sequences; 462,505,359 total letters
Query= NC_029255.1
Length=129563
Score E
Sequences producing significant alignments: (Bits) Value
seq314 98.7 8e-16
>seq314
Length=932230
Score = 98.7 bits (108), Expect = 8e-16
Identities = 271/409 (66%), Gaps = 10/409 (2%)
Strand=Plus/Plus
Query 118474 TCAATGTGATTCATATAGACATGAGCATCCCCAATTGTATGTATGAATTCACCAGGTGTA 118533
||||| ||||| |||||||||| ||||| || | || || | ||| || || |||
Sbjct 384071 TCAATATGATTATTATAGACATGTGCATCGCCCAAAGTGTGGACGAAATCCCCTGGTCGG 384130
Query 118534 AGCCCTGTCAGGTGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAGGA 118593
|| | || | ||||||||||| || || | |||| ||| ||| | |||||| ||
Sbjct 384131 AGATCAGTAATATGAGCAATCATATAGGTAAGCAAAGCGTACGAGGCAATATTAAATGGT 384190
Query 118594 ACACCCAGACCCATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCCCCGTTTGCA 118653
||||||| ||||| || || | ||||| ||||| ||||| | ||| || || |||
Sbjct 384191 ACACCCAATCCCATATCGGCACTGCGTTGGTATAATTGACAAGATAACTCTCCATTGGCA 384250
Query 118654 ACATAAAACTGACTTATGATGTGACATGGAGGCAGAACCATGGAACTCAGTTGGGCAGGA 118713
||| |||| || | ||||| || || || |||| | | | | |||||
Sbjct 384251 ACAAAAAATTGTGCAAGACAATGACAAGGTGGTAGCGCCATTTGAGGGATATCGACAGGA 384310
Query 118714 TTCCAGGCTG---TTAAAACATGCCTTCTGCTATATGG-TTCTACCTGTATACCCTCAAT 118769
||||| || | ||| || | | || || ||| || | ||| ||| |||||
Sbjct 384311 TTCCAAGCAGACATTATAATA---CGTCGATCATTTGGATTATTTCTG-ATAGTGTCAAT 384366
Query 118770 TAAATTCTGAATCTGATCCACACCCTTTCCAGTAT-ACTGAGACTCGCATCCTTTATATT 118828
|| | ||||| ||||| | ||||| | | | |||| || ||| | | || |
Sbjct 384367 TACTTGCTGAAGTTGATCTATACCCTCATCTTTGTAACTG-TCCTTGCAGTTTCTGTACT 384425
Query 118829 CTGCCCCAAAAAATCTCCATTGAAAACCATAAACAGGCCCCAGATCTCC 118877
||||||||| | ||| |||||||||||||| || || ||||| ||
Sbjct 384426 TGGCCCCAAAATGACGCCACTGAAAACCATAAACTGGGCCTAGATCACC 384474
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 414460099952584
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |