Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25]
3,306 sequences; 462,505,359 total letters
Query= NC_029304.1
Length=111246
Score E
Sequences producing significant alignments: (Bits) Value
seq603 104 2e-17
seq1558 98.7 7e-16
>seq603
Length=780983
Score = 104 bits (114), Expect = 2e-17
Identities = 104/135 (77%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942
||||||||||| | || || || ||||| ||||| |||||||| |||||| ||||
Sbjct 745663 GACAAAGAAGGAATCCCCCCAGATCAACAACGTTTAATCTTTGCCGGTAAACAACTGGAA 745722
Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002
|||| ||||| ||||||||||||||||||| || ||| || | ||||||||| |
Sbjct 745723 GACGGACGCACTCTGTCCGATTACAACATCCAGAAGGAGTCTACACTTCATTTGGTTCTT 745782
Query 28003 CGTTTGCGTGGCGGC 28017
||| | ||||| |||
Sbjct 745783 CGTCTACGTGGTGGC 745797
>seq1558
Length=2163639
Score = 98.7 bits (108), Expect = 7e-16
Identities = 164/235 (70%), Gaps = 4/235 (2%)
Strand=Plus/Plus
Query 27784 AGTAAAATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAA 27843
|| |||||||| ||||| || ||||| | ||||| || ||||| | || |||||
Sbjct 2033942 AGCAAAATGCAGATTTTCGTCAAAACCTTAACTGGTAAGACCATTACCTTAGAGGTCGAG 2034001
Query 27844 AGCACCGACG--ATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGA 27901
| ||| || | ||| |||||| ||||| || ||||| || | ||
Sbjct 2034002 CCTTCTGACACCATCGAAAAT--GTCAAAGCTAAAATCCAAGATAAAGAGGGCATCCCCC 2034059
Query 27902 TGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCG 27961
|| || || || || || || |||||||| |||||||| || | |||| ||||||||
Sbjct 2034060 CAGATCAACAGCGTTTGATCTTCGCCGGAAAGCAATTGGAAGATGGTCGCACCTTGTCCG 2034119
Query 27962 ATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016
| |||||||||||||| ||| || | ||||||||| ||||| | ||||| ||
Sbjct 2034120 ACTACAACATCCAAAAGGAGTCAACCCTCCATTTGGTTCTGCGTCTTCGTGGTGG 2034174
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 355848061636662
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |