Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25]
3,306 sequences; 462,505,359 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq1558 118 2e-21
seq603 113 1e-19
>seq1558
Length=2163639
Score = 118 bits (130), Expect = 2e-21
Identities = 161/225 (72%), Gaps = 0/225 (0%)
Strand=Plus/Minus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| | || || | || || || ||||| ||||||||||| || || | | |||
Sbjct 2034169 ACGAAGACGCAGAACCAAATGGAGGGTTGACTCCTTTTGGATGTTGTAGTCGGACAAGGT 2034110
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| |||||||||| ||||| || |||||||| | || ||||| || || || | ||
Sbjct 2034109 GCGACCATCTTCCAATTGCTTTCCGGCGAAGATCAAACGCTGTTGATCTGGGGGGATGCC 2034050
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
|| || || ||||| || ||| || ||||||||||||||||| || ||||| |
Sbjct 2034049 CTCTTTATCTTGGATTTTAGCTTTGACATTTTCGATGGTGTCAGAAGGCTCGACCTCTAA 2033990
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
|| || ||||| || || | || || || || | |||||||||
Sbjct 2033989 GGTAATGGTCTTACCAGTTAAGGTTTTGACGAAAATCTGCATTTT 2033945
>seq603
Length=780983
Score = 113 bits (124), Expect = 1e-19
Identities = 143/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| | ||| || || || || || || ||||| || || | | ||| | ||||||
Sbjct 747536 AGGACTAAGTGGAGGGTTGATTCCTTCTGAATGTTGTAGTCGGACAAGGTACGTCCATCC 747477
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|||| |||||||| || || || | |||||||| || || || | ||||||||| ||
Sbjct 747476 TCCAATTGCTTGCCGGCAAAAATCAAACGTTGTTGATCTGGTGGGATTCCTTCCTTATCT 747417
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
||||| || ||| || || || ||||||||||| ||||| || | ||||| ||
Sbjct 747416 TGGATTTTGGCTTTGACATTCTCAATGGTGTCAGATGGCTCAACTTCCAAGGTGATGGTT 747357
Query 211083 TTTCCCGTGAGAGTCTT 211099
|| || ||||| |||||
Sbjct 747356 TTGCCAGTGAGGGTCTT 747340
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159102900494690
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |