Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25] 3,306 sequences; 462,505,359 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq1558 118 2e-21 seq603 113 1e-19 >seq1558 Length=2163639 Score = 118 bits (130), Expect = 2e-21 Identities = 161/225 (72%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | || || | || || || ||||| ||||||||||| || || | | ||| Sbjct 2034169 ACGAAGACGCAGAACCAAATGGAGGGTTGACTCCTTTTGGATGTTGTAGTCGGACAAGGT 2034110 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | |||||||||| ||||| || |||||||| | || ||||| || || || | || Sbjct 2034109 GCGACCATCTTCCAATTGCTTTCCGGCGAAGATCAAACGCTGTTGATCTGGGGGGATGCC 2034050 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 || || || ||||| || ||| || ||||||||||||||||| || ||||| | Sbjct 2034049 CTCTTTATCTTGGATTTTAGCTTTGACATTTTCGATGGTGTCAGAAGGCTCGACCTCTAA 2033990 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 || || ||||| || || | || || || || | ||||||||| Sbjct 2033989 GGTAATGGTCTTACCAGTTAAGGTTTTGACGAAAATCTGCATTTT 2033945 >seq603 Length=780983 Score = 113 bits (124), Expect = 1e-19 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | ||| || || || || || || ||||| || || | | ||| | |||||| Sbjct 747536 AGGACTAAGTGGAGGGTTGATTCCTTCTGAATGTTGTAGTCGGACAAGGTACGTCCATCC 747477 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||| |||||||| || || || | |||||||| || || || | ||||||||| || Sbjct 747476 TCCAATTGCTTGCCGGCAAAAATCAAACGTTGTTGATCTGGTGGGATTCCTTCCTTATCT 747417 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 ||||| || ||| || || || ||||||||||| ||||| || | ||||| || Sbjct 747416 TGGATTTTGGCTTTGACATTCTCAATGGTGTCAGATGGCTCAACTTCCAAGGTGATGGTT 747357 Query 211083 TTTCCCGTGAGAGTCTT 211099 || || ||||| ||||| Sbjct 747356 TTGCCAGTGAGGGTCTT 747340 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159102900494690