Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25] 3,306 sequences; 462,505,359 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq603 98.7 9e-16 >seq603 Length=780983 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 39058 CCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCA 39117 || || | |||||||| || |||||||| ||| || || || |||||||| |||| Sbjct 746024 CCACCACGTAAGCGTAGAACTAAATGTAGAGTGGATTCCTTCTGAATATTATAGTCGGAC 745965 Query 39118 AGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGC 39177 ||||| ||| | || || | ||||||||| || || || | ||| || || || | ||| Sbjct 745964 AGTGTGCGTCCATCCTCCAACTGTTTGCCAGCGAAAATCAAACGTTGTTGATCTGGGGGG 745905 Query 39178 ACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACG 39237 | | || || || ||||| ||||| || | | |||||| | ||| || Sbjct 745904 ATTCCTTCCTTATCTTGAATTTTAGCTTTGACATTCTCAATGGTATCGGAAGGCTCAACC 745845 Query 39238 TCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 |||| ||||| |||||||||||| ||||| || || || ||||| Sbjct 745844 TCCAAAGTGATGGTTTTTCCCGTCAAAGTTTTGACGAAAATCTGCAT 745798 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429528292802378