Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25] 3,306 sequences; 462,505,359 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq2718 244 9e-60 >seq2718 Length=1670031 Score = 244 bits (270), Expect = 9e-60 Identities = 488/719 (68%), Gaps = 18/719 (3%) Strand=Plus/Minus Query 4371 ACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCA 4430 |||||||| || ||||| |||||||| ||||| | | ||| |||| ||| || || || Sbjct 71499 ACAAGCAAACGATCAGCCACAAATTCGATATAATCGGACATTAGTTTGCAATTCATACCG 71440 Query 4431 ATTAATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTG 4490 |||| |||| || | |||| || || || || || || || | || ||||| | Sbjct 71439 ATTAGATTCACCGGCAAAGCGTCAGTTAAGAATTCCTGCTCAATTTTAACAGCTTCAGAA 71380 Query 4491 ATTATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACAC 4550 ||||| || || || ||| |||||| | || ||| | | |||| ||||| Sbjct 71379 ATTATTTCAACAATACGCTCATTACTTGGTTTTTGTATTAAATGTTGGAACATCAAACAT 71320 Query 4551 GCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCG 4610 || || |||||||| | || || |||| ||| ||||| || ||||| || || || Sbjct 71319 GCGAAGTCACAATGAAGTCCCTCATCTCGTGAAATTAGTTCATTGGAAAATGTCAAGCCT 71260 Query 4611 GGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATG 4670 ||||||||||| | || |||||||| || || | ||||| ||| ||||| || Sbjct 71259 GGCATTAAACCACGTTTCTTAAGCCAGAAGATCGAAGCAAAACTGCCACTGAAGAAAATA 71200 Query 4671 CCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCTTT---- 4726 ||||| ||||| ||||| || | || || || || | |||| | ||| Sbjct 71199 CCTTCAACGGCAGCAAATGCAATTACACGTTCACCAAA---GTTGGCC--GACTTCGAAG 71145 Query 4727 -AATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGT 4785 |||||| | ||||| | || || ||| ||| || ||||| | |||||| | Sbjct 71144 AAATCCAAGCAAGCGCCCAATCTGCCTTACGCTTTACGGCAGGCATTGTCTCTATAGCAT 71085 Query 4786 TAAATAAT---TTACTTT-TTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTA 4841 | ||||| || |||| |||| | ||| | |||||| || || |||| || |||| Sbjct 71084 TGAATAAGCAATTCCTTTGTTTCGA----GTCCTTAATATATGTATCAATTAATATGCTA 71029 Query 4842 TACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCT 4901 |||||||||||||| | ||| || || ||||| |||||||| || ||||| | || ||| Sbjct 71028 TACATTTCAGAATGCACATTCTCCATCGCAATTTGAAATCCATAGAAGCAACGTGCCTCT 70969 Query 4902 GTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTG 4961 || ||||| ||||| | || || | ||| |||| ||||| || || ||||| ||| Sbjct 70968 GTCACTTGGACTTCCTGGCAGAAGCGTTCAACTACATTTTCATTCACAATACCATCAGAT 70909 Query 4962 GCTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTTTTTC 5021 || || ||||| || || || || || ||||| | |||| | | | || | | Sbjct 70908 GCGGCGAAAAAGGCTAACACGTGGGAAATAAAATGTCGTTCATTATCAGTGAGGCGTGCC 70849 Query 5022 CAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGC 5080 || | || |||||||| | ||| ||||| || || ||||| ||||| ||||| || Sbjct 70848 CAATCATCCATATCTTTAGAAAGATCTACTTCCTCTACTGTCCAGAACGATGCTTCTGC 70790 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427032393370898