Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25]
3,306 sequences; 462,505,359 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq3107 607 1e-168
seq2718 251 1e-61
>seq3107
Length=1323484
Score = 607 bits (672), Expect = 1e-168
Identities = 1269/1879 (68%), Gaps = 24/1879 (1%)
Strand=Plus/Plus
Query 76773 TTATCCAATGTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACCA 76832
||||||| ||||| || || | | | || ||||| ||||| | ||| ||||| ||
Sbjct 934418 TTATCCACAGTAAATTGTATAGCATTTGCAGCTGGTTTCGTACGCAAATAATACATGCCC 934477
Query 76833 GTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGA 76892
|| || ||||| |||| ||| ||||||| || || || || ||| | ||
Sbjct 934478 GTCTTGAGACCTGCCTTCCAGCCGAAGAAATGTATAGAAGTAAGCTTACCATAGTTGGGC 934537
Query 76893 TCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCC 76952
|| || | || || || | ||||||||||||||||||||| || || | ||| || |||
Sbjct 934538 TCAGCCACGTGTATGTTGAACGACTGACTTTGATCGATGAATGCACCGCGATCTGCAGCC 934597
Query 76953 ATTTTTATAATGGTCTTTTGA--GGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATAT 77010
||||| || || | |||| | | ||| ||||||| ||||||| | | | || |
Sbjct 934598 ATTTTGAT--TGATGTTTTCACGGAAATCTCCCAAACAGTTTTGTATAGATCGCGTATGT 934655
Query 77011 CATCTGG-AAGGTTT--GTATTTTGAATGGAACCACCATCTGATATAATTGTATTCTTTA 77067
| ||| | || || ||||||| ||||| || | | | |||||| ||||||| |
Sbjct 934656 GCTGTGGTATGGATTCAATATTTTGTATGGAGCCGCGACTGGTTATAATATTATTCTTCA 934715
Query 77068 TATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACTATTT 77127
||||||||| |||||| | ||| |||| | | | | | ||| |||| || | ||
Sbjct 934716 TATCATCATCCCACAAACCCAACTCGGTTAGATCGCGCAACAAGTGATGATTTACAACTT 934775
Query 77128 GAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATT 77187
||||||| || || | || | ||| || |||||||| || |||||||| | || |
Sbjct 934776 GAAATTCACCTGAAAGCACACGACGTGTATAAATATTGGAAGTGTATGGTTCAAATGACT 934835
Query 77188 CATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTAT 77247
||||||| |||| |||||| || || |||||||||||||| || || | || |||| |
Sbjct 934836 CATTGTTGCCCATAATTTGTGCTGTTGAAGCAGTTGGCATGGGCGCAAGCAGTAAAGAGT 934895
Query 77248 TTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAAG 77307
| | || ||||||| | ||||| || || | | |||||| ||||||||| | |
Sbjct 934896 TGCGGACACCATGTTGCTTTATTTTCTCCTTCAATTCGGTCCAATTCCAAAGATCAGTTG 934955
Query 77308 GTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATCCATTATATG 77367
|| |||||| | || || |||||||| || |||||| | ||| || | || |
Sbjct 934956 GTGTTTTATCCCACATGTCATACTGTAGAATACCCTTACTAACGGGTGAACCTTCGTAAG 935015
Query 77368 TTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTAATAAA 77427
||||||| || || | |||| |||| ||| ||||| |||||||| || || || ||||
Sbjct 935016 TTTCATAGGGGCCAAGTTTTTCGGCTAATTCGCAACTAGCTTCCAAGGCGCCATAGTAAA 935075
Query 77428 TTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGGATAATGTA 77487
|||||||||| || | || ||| | | | |||||| ||| || | |||||| | |
Sbjct 935076 TTGTTTCGAATATTTGCTGATTCAAAAGTAATGCTTCTTCACTTTCGTATGGATAACGCA 935135
Query 77488 AAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTAT 77547
| ||| || || || || || ||||| ||||||||||| || || | |||||| ||
Sbjct 935136 TTAAAATTAAAGCGTCAGCAAAACCCTGTACTCCAATACCGATGGGACGATGTCTGAAAT 935195
Query 77548 TGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGATTTC 77607
| || | | || || || | ||||||| |||||||||||| |||||||| | ||| |
Sbjct 935196 TCGATTTCCTTGCCTCCGGTAAGGGATAATGATTAATGTCTATTATTTTATTCAAATTAC 935255
Query 77608 TAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAA---TCTTCCATCTATAA 77664
||| ||| || || || || ||| || | | || | | | |
Sbjct 935256 GTGTAACGGTTTTGGTGACCTCTTTGAGGCGCTTAAAGTCGTACGTTTTTTCGGGTGTGA 935315
Query 77665 CAAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTAGCGTTGGCAT 77724
||||||| ||||| || || || || | || || || |||||||||| || | ||
Sbjct 935316 CAAACATATTCAACGCGATTGAAGCCAAGTTGCACACAGCTACCTCATCAGGTGCTGAAT 935375
Query 77725 ATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTGC 77784
||| | || |||||||||| ||||||||| || || || || | ||| ||||| || |
Sbjct 935376 ATTCCACAATTTCGGTACATAAATTACTACACTTAATTGTACCAACATTCTGTTGATTAC 935435
Query 77785 TCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATT 77844
||||| ||| || | || ||||| | || | || || ||||| || | || ||||
Sbjct 935436 TCTTTCGATTACAAGCATCTTTATACAACATGTATGGTGTGCCGGTCTCCACTTGCGATT 935495
Query 77845 CGATAATAGATTTCCAGACGACTCT-AGCTTTTA---TCATAGATTTGTATCGCCTCTCT 77900
| ||||| | | | | |||| | ||||||| || | ||| | | || | ||
Sbjct 935496 CAATAAT-GCTAAACCAAAGACTTTGTGCTTTTACTTTCTT--ATTAGCA-CGTCCTTCC 935551
Query 77901 CTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGG 77960
|||||||| ||||| ||| || || || ||||| || |||| | || ||
Sbjct 935552 TGTTCATATTTCAGATATAATTTTTCGAACTCTTCACCCCATACTTCATGTAGACCGGGA 935611
Query 77961 CATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGA 78020
|| | | ||| ||||| | |||||||| ||| | | || ||||||||||| |||
Sbjct 935612 CACTTGTGTGGACACATTAGCGACCAGTCTTCATTGGCTTCTACACGTTTCATAAATAGA 935671
Query 78021 TCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTC 78080
||||||||||| | |||| ||| | ||||| || | ||| ||||| || || || ||
Sbjct 935672 TCAGGTATCCACAAAGCATAAAACAAATCTCTGGCGCGATGCTCTTCTTTCCCAGTGTTT 935731
Query 78081 TTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATA 78140
|| || | ||| | ||| | | |||||||| |||||||||||| || || || || |
Sbjct 935732 TTCTTCAAATCCAAAAATTGGAAAATATCAGCATGCCATGGTTCCAGGTAGATGGCAAAT 935791
Query 78141 ACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTC 78200
| || || |||||| || || ||||| | ||| | || ||||| | |||| |
Sbjct 935792 GCGCCTGGACGTTTACCGCCACCTTGATCCACATAGCGTGCTACATTATTGAACACTCGC 935851
Query 78201 AACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCG 78260
||||| || | | |||||| ||||| |||||||| || | ||| | | || ||||
Sbjct 935852 AACATAGGCACCAAACCGTTTGATGTGCCATTTGTACCCGCAATTGCAGTGCCTTTTGCA 935911
Query 78261 CGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCA---A 78317
|| || | | | | || || || || || || || || | || || |
Sbjct 935912 CGTATGCAATGTACGTTCAGACCAATACCCCCAGCAGATTTGGAAATCAATGCACATTGA 935971
Query 78318 CGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAG 78377
|| | |||| | | || || || || || |||| |||| | || ||||| ||
Sbjct 935972 TGTGCCGATGT---GAAAATCCCATCAATGGAATCGTCCACCATGGTCAGTAGAAAGCAT 936028
Query 78378 CTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAAC 78437
|||| ||| | || || | ||| |||| || ||||| |||||||||||
Sbjct 936029 GATGACAATTGCGGCTGCTTGGTGGCAGCAGCGAATAGCGTTGGAGAAGCATGCGTAAAA 936088
Query 78438 CATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATT 78497
| ||| ||||| | ||||||||||| || |||| |||||||| ||| ||
Sbjct 936089 TAACGTTCGGAAAGCAAGTTGTATGTTTCGATTGCTGCATCTATGTCTTCGCCATGTATA 936148
Query 78498 CCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTC 78557
|| | || |||||||| ||||||||||| |||| ||||| | || ||||| |||
Sbjct 936149 CCGATGGCAACACGCATTAACATATGCTGTGGTCGCTCAACAATTTTGCCATTTAATTTT 936208
Query 78558 AACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTCTCG 78617
| ||| || || ||| | |||||||||||||||||| || || ||| || | ||
Sbjct 936209 AGCAAATAGGAACGTTCAAGAGTTTTAAAACCAAAATAATTATAACCAAAATCGCGGTCA 936268
Query 78618 TAAATAATAACAGAATTTA 78636
|||||||| |||| ||||
Sbjct 936269 TAAATAATGGCAGAGTTTA 936287
>seq2718
Length=1670031
Score = 251 bits (278), Expect = 1e-61
Identities = 479/702 (68%), Gaps = 9/702 (1%)
Strand=Plus/Minus
Query 47975 ATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTATAAGTTTAAC 48034
||| || || ||||| ||||| ||| | || |||||||| || || || || ||
Sbjct 71488 ATCAGCCACAAATTCGATATAATCGGACATTAGTTTGCAATTCATACCGATTAGATTCAC 71429
Query 48035 TGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGCATCCACTATTAT--CGAT 48092
|| | ||| || || | || || || || || | ||||| || ||||| | |
Sbjct 71428 CGGCAAAGCGTCAGTTAAGAATTCCTGCTCAATTTTAACAGCTTCAGAAATTATTTCAAC 71369
Query 48093 GTTACCGTTTCCTCACTTGGTGGATACAACAAATGTTTAAACATTAAACATGCAAAATCA 48152
||| | | | ||||||| | | ||||||| ||||| |||||||| || |||
Sbjct 71368 AATACGCT--CATTACTTGGTTTTTGTATTAAATGTTGGAACATCAAACATGCGAAGTCA 71311
Query 48153 CAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGT 48212
|||||||| || ||||||| ||||| ||| || |||||||| | || |||||||
Sbjct 71310 CAATGAAGTCCCTCATCTCGTGAAATTAGTTCATTGGAAAATGTCAAGCCTGGCATTAAA 71251
Query 48213 CCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACG 48272
|||||||| || ||||| || || | || ||| ||| ||||| || ||||| |||
Sbjct 71250 CCACGTTTCTTAAGCCAGAAGATCGAAGCAAAACTGCCACTGAAGAAAATACCTTCAACG 71191
Query 48273 GCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGC----TTCGTTGTGTATCCACCGTTG 48328
|| |||||||| | | | || || | |||| |||| | ||||| |
Sbjct 71190 GCAGCAAATGCAATTACACGTTCACCAAAGTTGGCCGACTTCGAAGAA-ATCCAAGCAAG 71132
Query 48329 TGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGtt 48388
|||||||| ||||| |||||| ||||||||| ||||||||||| || | | ||
Sbjct 71131 CGCCCAATCTGCCTTACGCTTTACGGCAGGCATTGTCTCTATAGCATTGAATAAGCAATT 71072
Query 48389 tttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGAGTGAAT 48448
||| || || |||| || ||||| ||||| | ||||||||||| || || |
Sbjct 71071 CCTTTGTTTCGAGTCCTTAATATATGTATCAATTAATATGCTATACATTTCAGAATGCAC 71012
Query 48449 ATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTACCTCCGT 48508
||| || || || || |||||||| || || || | || ||||| | || || |||
Sbjct 71011 ATTCTCCATCGCAATTTGAAATCCATAGAAGCAACGTGCCTCTGTCACTTGGACTTCCTG 70952
Query 48509 ACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAATGCTAA 48568
|| || |||||| | | ||| ||||| || || |||||| || || ||||| |||||
Sbjct 70951 GCAGAAGCGTTCAACTACATTTTCATTCACAATACCATCAGATGCGGCGAAAAAGGCTAA 70892
Query 48569 TACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGTTTATTCCAGTCATTGATATCTTT 48628
|| || |||||||| | ||| || ||| || ||| |||| ||||||||
Sbjct 70891 CACGTGGGAAATAAAATGTCGTTCATTATCAGTGAGGCGTGCCCAATCATCCATATCTTT 70832
Query 48629 TGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGC 48670
|| | ||||||||| || ||||||| || ||||| |||||
Sbjct 70831 AGAAAGATCTACTTCCTCTACTGTCCAGAACGATGCTTCTGC 70790
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694640092811840
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