Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25] 3,306 sequences; 462,505,359 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq3107 553 2e-152 seq2718 260 2e-64 >seq3107 Length=1323484 Score = 553 bits (612), Expect = 2e-152 Identities = 1244/1854 (67%), Gaps = 34/1854 (2%) Strand=Plus/Plus Query 75398 GCTGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAA 75457 |||||||| ||||| | ||| ||||| || || || ||||| |||| ||| ||||| Sbjct 934448 GCTGGTTTCGTACGCAAATAATACATGCCCGTCTTGAGACCTGCCTTCCAGCCGAAGAAA 934507 Query 75458 TGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCTATATGAATATTCATCGACTGACTT 75517 || || || || || ||| | || || || | || || || | |||||||||| Sbjct 934508 TGTATAGAAGTAAGCTTACCATAGTTGGGCTCAGCCACGTGTATGTTGAACGACTGACTT 934567 Query 75518 TGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGG--AATTT 75575 ||||||||||| || || | ||| || |||||||| || || | |||| | | ||| | Sbjct 934568 TGATCGATGAATGCACCGCGATCTGCAGCCATTTTGAT--TGATGTTTTCACGGAAATCT 934625 Query 75576 CCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAA--GATTTG-TATTTTGAATGG 75632 |||||| ||||||| | | | || | | ||| | |||| ||||||| |||| Sbjct 934626 CCCAAACAGTTTTGTATAGATCGCGTATGTGCTGTGGTATGGATTCAATATTTTGTATGG 934685 Query 75633 ATCCGCCATCAGATATAATTGTATTCTTGATCTCATCATTCCACAATTTTCTCTCGGTTA 75692 | |||| | | |||||| ||||||| || ||||||| |||||| |||||||| Sbjct 934686 AGCCGCGACTGGTTATAATATTATTCTTCATATCATCATCCCACAAACCCAACTCGGTTA 934745 Query 75693 AAACTCTAAGGAGATGAGGATTAACAATTTGAAATTCTCCAGACAATACTCTTCGAGTGT 75752 | | | | | ||| |||| |||| ||||||||| || || | || | || || | Sbjct 934746 GATCGCGCAACAAGTGATGATTTACAACTTGAAATTCACCTGAAAGCACACGACGTGTAT 934805 Query 75753 AAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAG 75812 ||||||| || |||||||| | || |||||||| |||| |||||| || ||||||| Sbjct 934806 AAATATTGGAAGTGTATGGTTCAAATGACTCATTGTTGCCCATAATTTGTGCTGTTGAAG 934865 Query 75813 CAGTCGGCATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTT 75872 |||| ||||| || || | || |||| || | || ||||||| | ||||| || | Sbjct 934866 CAGTTGGCATGGGCGCAAGCAGTAAAGAGTTGCGGACACCATGTTGCTTTATTTTCTCCT 934925 Query 75873 TTAGATATTTCCAATCCCAAAGATCTGATGGTACAACATCCCAGAGATCGTATTGTAGAA 75932 | | | |||||| ||||||||| | |||| |||||| | || || ||||||| Sbjct 934926 TCAATTCGGTCCAATTCCAAAGATCAGTTGGTGTTTTATCCCACATGTCATACTGTAGAA 934985 Query 75933 TTCCGTTGCTAGCATATGATCCATTATATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTT 75992 | || || ||| | ||| || | || ||||| || | || ||||| |||| || Sbjct 934986 TACCCTTACTAACGGGTGAACCTTCGTAAGTTTCATAGGGGCCAAGTTTTTCGGCTAATT 935045 Query 75993 CGCAACTCGCCTCTAACGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTAAGATCTT 76052 ||||||| || || || || || || |||||||||||||| || | || ||| | | | Sbjct 935046 CGCAACTAGCTTCCAAGGCGCCATAGTAAATTGTTTCGAATATTTGCTGATTCAAAAGTA 935105 Query 76053 GCGCTTCAAGACTATCAAAAGGATAATGTAAAAGAATAAATGCATCTGCTAGTCCCTGAA 76112 ||||| ||| || | |||||| | | | ||| || || || || | ||||| | Sbjct 935106 ATGCTTCTTCACTTTCGTATGGATAACGCATTAAAATTAAAGCGTCAGCAAAACCCTGTA 935165 Query 76113 CTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTC--AGCTTCTGGAATAGGGTA 76170 |||||||||| || || | |||||| ||| | ||||| || || || | || || Sbjct 935166 CTCCAATACCGATGGGACGATGTCTGAAATTCG--ATTTCCTTGCCTCCGGTAAGGGATA 935223 Query 76171 ATAATTAATATCTATAATTTTATTGAGATTTCTGACAACTACTTTAACCACGTCCTTTAG 76230 || |||||| ||||| |||||||| | ||| | ||| ||| || || || || Sbjct 935224 ATGATTAATGTCTATTATTTTATTCAAATTACGTGTAACGGTTTTGGTGACCTCTTTGAG 935283 Query 76231 TTTGAGAAAATCAAA---TTTTCCATCTATCACAAACATATTAAGAGCTATAGATGCTAG 76287 ||| || | |||| | | | ||||||||||| | || || || || | Sbjct 935284 GCGCTTAAAGTCGTACGTTTTTTCGGGTGTGACAAACATATTCAACGCGATTGAAGCCAA 935343 Query 76288 ATTACAAACGGCTACCTCATTAGCATTGGCATATTGTATTATCTCCGTGCATAGATTACT 76347 || || || |||||||||| || | ||||| | || || || |||| |||||| Sbjct 935344 GTTGCACACAGCTACCTCATCAGGTGCTGAATATTCCACAATTTCGGTACATAAATTACT 935403 Query 76348 ACACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAG 76407 |||||| || || |||| ||| ||||| || |||||| ||||| | || ||||| | Sbjct 935404 ACACTTAATTGTACCAACATTCTGTTGATTACTCTTTCGATTACAAGCATCTTTATACAA 935463 Query 76408 AACAAACGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCT-AG 76466 | | || || || || || | || ||||| ||||| | | | | |||| | | Sbjct 935464 CATGTATGGTGTGCCGGTCTCCACTTGCGATTCAATAAT-GCTAAACCAAAGACTTTGTG 935522 Query 76467 CTTTTATTATAGATTTGTATCGCTTC--TCTCTTTCATATTGTGTATATAACCGTTCAAA 76524 |||||| | | || || | | || || |||||||| |||||| ||| || Sbjct 935523 CTTTTACTTT--CTTATTAGCACGTCCTTCCTGTTCATATTTCAGATATAATTTTTCGAA 935580 Query 76525 TTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGACCACTC 76584 || || ||||| || |||| | ||| ||||| | | |||||||| | ||||| || Sbjct 935581 CTCTTCACCCCATACTTCATGTAGACCGGGACACTTGTGTGGACACATTAGCGACCAGTC 935640 Query 76585 ACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATC 76644 ||| | | || ||||||||||| |||||||||||||| | |||| ||| | ||| Sbjct 935641 TTCATTGGCTTCTACACGTTTCATAAATAGATCAGGTATCCACAAAGCATAAAACAAATC 935700 Query 76645 TCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATC 76704 || || | | | ||||| || || || || || || | ||| | || | | |||||| Sbjct 935701 TCTGGCGCGATGCTCTTCTTTCCCAGTGTTTTTCTTCAAATCCAAAAATTGGAAAATATC 935760 Query 76705 AGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATC 76764 || |||||||||||| || || || || | | || || |||||| || || ||||| Sbjct 935761 AGCATGCCATGGTTCCAGGTAGATGGCAAATGCGCCTGGACGTTTACCGCCACCTTGATC 935820 Query 76765 TATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACC 76824 | ||| | || ||||| | |||| |||||| || | | ||||| ||||| || Sbjct 935821 CACATAGCGTGCTACATTATTGAACACTCGCAACATAGGCACCAAACCGTTTGATGTGCC 935880 Query 76825 ATTTGTTCCAGAAATATAACTTCCACATGCACGAAT---AT-TACTAATAGATAGGCCTA 76880 |||||| || | ||| | | || |||||| || || ||| ||| || | Sbjct 935881 ATTTGTACCCGCAATTGCAGTGCCTTTTGCACGTATGCAATGTACGTTCAGA----CCAA 935936 Query 76881 TTCCTCCTGCCATTTTAGAGATTAGAGCACA---GCGTTTCAATGTGTCATAGATGCCCT 76937 | || || || ||| || || | ||||| || | ||||| | || || | Sbjct 935937 TACCCCCAGCAGATTTGGAAATCAATGCACATTGATGTGCCGATGTG---AAAATCCCAT 935993 Query 76938 CTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTC 76997 | || ||| |||| |||| | || ||||| || |||| ||| | || || Sbjct 935994 CAATGGAATCGTCCACCATGGTCAGTAGAAAGCATGATGACAATTGCGGCTGCTTGGTGG 936053 Query 76998 CTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATG 77057 | ||| || | || ||||| ||||| || || | ||| ||||| | ||||||| Sbjct 936054 CAGCAGCGAATAGCGTTGGAGAAGCATGCGTAAAATAACGTTCGGAAAGCAAGTTGTATG 936113 Query 77058 TTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAACATAT 77117 |||| || |||| ||||| || ||| || || | || |||||||| ||||||| Sbjct 936114 TTTCGATTGCTGCATCTATGTCTTCGCCATGTATACCGATGGCAACACGCATTAACATAT 936173 Query 77118 GCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTT 77177 |||| ||||| || ||| | || ||||| ||| | ||| || || ||| | ||||| Sbjct 936174 GCTGTGGTCGCTCAACAATTTTGCCATTTAATTTTAGCAAATAGGAACGTTCAAGAGTTT 936233 Query 77178 TAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACCGAATTTA 77231 ||||||||||||| || || ||| || | || |||||||| | || |||| Sbjct 936234 TAAAACCAAAATAATTATAACCAAAATCGCGGTCATAAATAATGGCAGAGTTTA 936287 >seq2718 Length=1670031 Score = 260 bits (288), Expect = 2e-64 Identities = 480/701 (68%), Gaps = 7/701 (1%) Strand=Plus/Minus Query 46464 ATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGTTTGAC 46523 ||| || || ||||| ||||| ||| | || |||||||| || || || || || Sbjct 71488 ATCAGCCACAAATTCGATATAATCGGACATTAGTTTGCAATTCATACCGATTAGATTCAC 71429 Query 46524 CGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATCCGATATTAT--CGAT 46581 ||| | ||| || || | || || || ||||| | ||||| || || ||||| | | Sbjct 71428 CGGCAAAGCGTCAGTTAAGAATTCCTGCTCAATTTTAACAGCTTCAGAAATTATTTCAAC 71369 Query 46582 GTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAACATGCAAAATCA 46641 ||| | | | ||||||| || || ||||||| ||||| |||||||| || ||| Sbjct 71368 AATACGCT--CATTACTTGGTTTTTGTATTAAATGTTGGAACATCAAACATGCGAAGTCA 71311 Query 46642 CAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGT 46701 |||||||| || ||||||| ||||| ||| || |||||||| | || ||||||| Sbjct 71310 CAATGAAGTCCCTCATCTCGTGAAATTAGTTCATTGGAAAATGTCAAGCCTGGCATTAAA 71251 Query 46702 CCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACA 46761 ||||| || || ||||| || || | || ||| ||| ||||| || ||||| || Sbjct 71250 CCACGTTTCTTAAGCCAGAAGATCGAAGCAAAACTGCCACTGAAGAAAATACCTTCAACG 71191 Query 46762 GCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATT---ATGAATCCACCTTTGA 46818 || || ||||| | | | || || | |||| || | |||||| | Sbjct 71190 GCAGCAAATGCAATTACACGTTCACCAAAGTTGGCCGACTTCGAAGAAATCCAAGCAAGC 71131 Query 46819 GCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGttt 46878 |||||||| ||||| |||||| ||||||||| ||||||||||| || | | || Sbjct 71130 GCCCAATCTGCCTTACGCTTTACGGCAGGCATTGTCTCTATAGCATTGAATAAGCAATTC 71071 Query 46879 ttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATGAATG 46938 ||| | || |||| ||||||||| ||||| | ||||||||||| ||||| | Sbjct 71070 CTTTGTTTCGAGTCCTTAATATATGTATCAATTAATATGCTATACATTTCAGAATGCACA 71011 Query 46939 TTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCTGTA 46998 || || || || || |||||||| || || || | ||| || || | || || || Sbjct 71010 TTCTCCATCGCAATTTGAAATCCATAGAAGCAACGTGCCTCTGTCACTTGGACTTCCTGG 70951 Query 46999 CAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAAT 47058 || || |||||| | ||| |||||||| || |||||| || || ||||| || || Sbjct 70950 CAGAAGCGTTCAACTACATTTTCATTCACAATACCATCAGATGCGGCGAAAAAGGCTAAC 70891 Query 47059 ACATGTTTAATAAAATATTTTTCATCGGTAGTCAGTTTATTCCAGTCATTGATATCTTTT 47118 || || |||||||| | ||||| ||| || ||| |||| |||||||| Sbjct 70890 ACGTGGGAAATAAAATGTCGTTCATTATCAGTGAGGCGTGCCCAATCATCCATATCTTTA 70831 Query 47119 GATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGC 47159 || | ||||||||| || |||||||||| || || ||||| Sbjct 70830 GAAAGATCTACTTCCTCTACTGTCCAGAACGATGCTTCTGC 70790 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712904937985920