Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25] 3,306 sequences; 462,505,359 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq2718 251 7e-62 >seq2718 Length=1670031 Score = 251 bits (278), Expect = 7e-62 Identities = 470/688 (68%), Gaps = 2/688 (0%) Strand=Plus/Minus Query 23343 ATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTTTATACCTATTAGTTTTAC 23402 ||| || |||||||| ||||| | |||| | | | || ||||| ||||| || || Sbjct 71488 ATCAGCCACAAATTCGATATAATCGGACATTAGTTTGCAATTCATACCGATTAGATTCAC 71429 Query 23403 TGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACAGCATCTTTAATTATTTGAAC 23462 || | || ||| ||||||| | ||||| |||||| || |||||||| ||| Sbjct 71428 CGGCAAAGCGTCAGTTAAGAATTCCTGCTCAATTTTAACAGCTTCAGAAATTATTTCAAC 71369 Query 23463 AATAACTTCTTCACTAGGTGGATATTTTAAATACTTAAACAATAAACATGCAAAATCACA 23522 |||| || | ||| ||| | | |||||| | |||| |||||||| || ||||| Sbjct 71368 AATACGCTCATTACTTGGTTTTTGTATTAAATGTTGGAACATCAAACATGCGAAGTCACA 71309 Query 23523 ATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCC 23582 ||| || || ||||| | ||| | |||||| |||||||| || ||||||||||| || Sbjct 71308 ATGAAGTCCCTCATCTCGTGAAATTAGTTCATTGGAAAATGTCAAGCCTGGCATTAAACC 71249 Query 23583 TCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGC 23642 ||||| |||| ||| || || | |||||| || ||||||||||| ||||| || Sbjct 71248 ACGTTTCTTAAGCCAGAAGATCGAAGCAAAACTGCCACTGAAGAAAATACCTTCAACGGC 71189 Query 23643 CGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGAAATCCAtttttttGT 23702 ||||| || | | |||| |||||| | || | ||||||||| | Sbjct 71188 AGCAAATGCAATTACACGTTCACCAAAGTTGGCCGACTTCGAAGAAATCCAAGCAAGCGC 71129 Query 23703 CCAATTAGCCTTCAATTTTAC-ACACTCAATTGTTTCAATTGCTTTTAAGAGAAAAGTTT 23761 ||||| ||||| ||||| || | ||||| || || || || || | || | Sbjct 71128 CCAATCTGCCTTACGCTTTACGGCAGGC-ATTGTCTCTATAGCATTGAATAAGCAATTCC 71070 Query 23762 TTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATAT 23821 ||| || || | |||||||||||||||| || ||||||||||||||||| | || Sbjct 71069 TTTGTTTCGAGTCCTTAATATATGTATCAATTAATATGCTATACATTTCAGAATGCACAT 71010 Query 23822 TTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAA 23881 | || || ||||| ||||| ||||| || || | || || | || ||| || || | Sbjct 71009 TCTCCATCGCAATTTGAAATCCATAGAAGCAACGTGCCTCTGTCACTTGGACTTCCTGGC 70950 Query 23882 AAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAA 23941 | || | || | ||| |||||| || |||||||||||| || || || || || | | Sbjct 70949 AGAAGCGTTCAACTACATTTTCATTCACAATACCATCAGATGCGGCGAAAAAGGCTAACA 70890 Query 23942 CATATTTTATAAAATGTCTTTCATCAGTTGATAATTTTTTCCAATCATTAATATCTTTTG 24001 | | |||||||||| ||||| | | | | |||||||| |||||||| | Sbjct 70889 CGTGGGAAATAAAATGTCGTTCATTATCAGTGAGGCGTGCCCAATCATCCATATCTTTAG 70830 Query 24002 ATAAATCAACTTCATCAACTGTCCAAAA 24029 | | ||| ||||| || |||||||| || Sbjct 70829 AAAGATCTACTTCCTCTACTGTCCAGAA 70802 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521466449508400