Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25] 3,306 sequences; 462,505,359 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq603 129 4e-25 seq1558 93.3 3e-14 >seq603 Length=780983 Score = 129 bits (142), Expect = 4e-25 Identities = 156/210 (74%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| ||||| || |||||| |||||||||||||||| || ||| |||| ||| Sbjct 745778 ACCAAATGAAGTGTAGACTCCTTCTGGATGTTGTAATCGGACAGAGTGCGTCCGTCTTCC 745719 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 || || || ||||||||||| ||||| || ||||||| || | ||||| || || Sbjct 745718 AGTTGTTTACCGGCAAAGATTAAACGTTGTTGATCTGGGGGGATTCCTTCTTTGTCTTGA 745659 Query 44249 ATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| |||| || || | || || |||| | ||| ||||||| || || ||||| Sbjct 745658 ATCTTA-GCTTTAACATTTTCAATAGTATCGGATGGTTCAACCTCCAGAGTGATGGTCTT 745600 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || | ||||||||||||||||||||| Sbjct 745599 GCCAGTCAAGGTCTTCACGAAGATTTGCAT 745570 Score = 91.5 bits (100), Expect = 1e-13 Identities = 137/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 44147 TCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAG 44206 ||||| || || ||||| |||| | || | || || || ||||| |||||||| Sbjct 747743 TCCTTCTGTATATTGTAGTCGGACAAAGTACGTCCATCCTCAAGTTGCTTGCCGGCAAAA 747684 Query 44207 ATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT 44266 |||||||| || ||||||| || | ||||| || || ||||| ||| || || Sbjct 747683 ATCAAACGTTGTTGATCTGGTGGAATGCCTTCTTTATCTTGGATCTTAGCCTT-AACATT 747625 Query 44267 C-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | | ||||| || | || || || |||| || || || || || ||||||||||| || Sbjct 747624 CTCAATGGTATCTGAGGGCTCGACTTCCAAGGTGATGGTTTTGCCAGTGAGGGTCTTAAC 747565 Query 44326 GAAGATTTGCAT 44337 |||||||||||| Sbjct 747564 GAAGATTTGCAT 747553 >seq1558 Length=2163639 Score = 93.3 bits (102), Expect = 3e-14 Identities = 138/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 44146 CTCCTTTTGGATGTTGTAATCGG-CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAA 44204 |||||||||||||||||| |||| | || || || | || |||| ||||| ||||| | Sbjct 2034139 CTCCTTTTGGATGTTGTAGTCGGACAAGGTG-CGACCATCTTCCAATTGCTTTCCGGCGA 2034081 Query 44205 AGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATG 44264 ||||||||||||| ||||||| || | || || || || || || || | Sbjct 2034080 AGATCAAACGCTGTTGATCTGGGGGGATGCCCTCTTTATCTTGGATTTTAGCTTTGACAT 2034021 Query 44265 TTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCA 44324 || | |||||||| | | || ||||| | ||||| ||||| || || | ||| || | Sbjct 2034020 TTTCGATGGTGTCAGAAGGCTCGACCTCTAAGGTAATGGTCTTACCAGTTAAGGTTTTGA 2033961 Query 44325 CGAAGATTTGCAT 44337 |||| || ||||| Sbjct 2033960 CGAAAATCTGCAT 2033948 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359975895311802