Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25] 3,306 sequences; 462,505,359 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq669 111 2e-19 >seq669 Length=2794457 Score = 111 bits (122), Expect = 2e-19 Identities = 275/413 (67%), Gaps = 22/413 (5%) Strand=Plus/Plus Query 155730 CGACTCAACGCCGTCGATTGAGCGGCGCGTACCAACCCTTCCAATTCAGCGCCGCTGTAA 155789 ||| ||| || || ||||| || || || ||||| ||||||| || ||||| || | Sbjct 431603 CGATTCATAGCGGTAGATTGTGCTGCACGCACCAAACCTTCCAGCTCGGCGCCACTAAAG 431662 Query 155790 TTTTTAGTTTCAACG--GCTATTTTATTTAAGTCTACGTCGGAAGCTAATATGTTGTGAG 155847 || || ||| || | || |||| ||| |||| || || || | ||||| Sbjct 431663 TTCTTCGTT--AATGTAGCGATTTCCTTTGAGTCAACATCACCGGCAATCTTGTTGA--- 431717 Query 155848 ATTTCATTTTA-GCAACGT--GCACCTTTAAAATTTGAAGACGCCCCTTTTCATCGGGTA 155904 ||| | || || ||| | | || | |||||| | ||| |||| ||| | ||| | Sbjct 431718 ATTCCCGCATACGCTTCGTATGTATATTCAGAATTTGCACACGACCCTCTTCGTTGGGCA 431777 Query 155905 ATCCAATTTCTATCTTCAATTCCAACCGCCCAGGTCTTAATAATGCTTCGTCAATTAAGT 155964 | | ||| || || | || ||||| || || |||| | || ||||||||||| | || Sbjct 431778 AACTAATCTCCATTTGCACCTCCAAGCGACCGGGTCGCAGCAAAGCTTCGTCAATCATGT 431837 Query 155965 CGGGTCTGTTGGTCATACCTATGATTAAAATGTTGTTTAAAGATTCTACACCGTCTATTT 156024 | ||||||| ||||| || || | || |||||||| || ||| ||||| || |||| Sbjct 431838 CACGTCTGTTTGTCATGCCGATAACCAATATGTTGTTCAATTGTTCGACACCATCGATTT 431897 Query 156025 TAGACAATAATTGATTGACTACGGCGTCGTGCGTGGCGTTAT---CA---------CCGC 156072 ||| | ||||||||||| || | ||||| | | ||| || || | Sbjct 431898 TAGCGAGCAATTGATTGACCACTGTATCGTGTACGCCACTATTGCCAGCGACCGAGCCAC 431957 Query 156073 GTTTTTTACACAGAGCATCTATTTCATCGAAGACGATAACGTGTAATCCGCTG 156125 || ||| || | |||||||||||||||||| | |||| || || || ||| Sbjct 431958 GTGCTTTGCAGATAGCATCTATTTCATCGAAAATTATAATATGCAAACCACTG 432010 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 667047633117360