Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20oleae_20[refseq_20GCF_5F001188975.1_202015-07-29] 36,198 sequences; 471,780,370 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq28 168 5e-37 >seq28 Length=1372515 Score = 168 bits (186), Expect = 5e-37 Identities = 414/623 (66%), Gaps = 6/623 (1%) Strand=Plus/Plus Query 101645 GGAAACGGTCTAGGAGTTCGCGTCAACTGCATTTTAAGAGCATCAATGTGATCTACATAG 101704 ||||||| ||||| |||| || ||||| | | || || ||||| |||| |||| Sbjct 389848 GGAAACGCCCTAGGTTTTCGTGTTAACTGTTCTGTTAGCGCTTCAATATGATTATTATAG 389907 Query 101705 ATGTGAGCATCTCCTATAGTATGGATAAACTCTCCAGGCACTAGATTAGTGACATGAGCA 101764 | || ||||| || | ||| |||| || || || ||| |||| ||| | ||||||| Sbjct 389908 ACATGTGCATCACCCAAAGTGTGGACGAAATCCCCTGGCCGGAGATCAGTAATATGAGCA 389967 Query 101765 ATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCCATATCA 101824 |||||| | || | | || || ||||| |||||||| || || || ||||| ||| Sbjct 389968 ATCATGTAGGTAAGTAAAGCGTACGAGGCAATATTAAATGGTACACCCAATCCCATGTCA 390027 Query 101825 GCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACATAAAATTGACTTAAT 101884 || | ||| || | |||||| || | || ||||| ||| ||||||| | | Sbjct 390028 GCACTGCGTTGGTATAATTGACAAGATAACTCTCCATTGGCAACAAAAAATTGTGTAAGG 390087 Query 101885 ACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACATTCCAAGCACACATTAAC 101944 ||||||||| || | |||||| |||||| || |||||||||| |||||| Sbjct 390088 CAATGACAAGGTGGTAGAGCCATTTGAGGAATATCGACTGGATTCCAAGCAGACATTATA 390147 Query 101945 ATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAATCAACTGTTTTAATTGGTCAACT 102004 || | || ||| | || || || | | || ||||| | || | | ||| || | Sbjct 390148 ATACGTCGATCATTTGGATTGTTTCTGACTGTGTCAATTACTTGCTGAAGTTGATCTATA 390207 Query 102005 CCTTCTCCTTTATAATCGCGCCCAACACCTT-TATATTCTGCTCCGAAATGCCTCCACTG 102063 || || |||| ||| | || || || | || | || || ||||| | |||||| Sbjct 390208 CCCTCATCTTTGTAAGTG-TCCTTGCAATTTCTGTACTTGGCCCCAAAATGACGCCACTG 390266 Query 102064 AAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCATAAAAACCAAGTTTATCTAA 102123 ||| ||||| || || || ||||| ||||| |||||||| |||| ||| ||| ||||| Sbjct 390267 AAAACCATAAACTGGGCCTAGATCACCTTCTTCTCTGTCGGAAAACCCACATTTGTCTAA 390326 Query 102124 AAATGATCTAGAT--CCATTCGCATCCCAAATGTGCACGCCAGCTGCTGATAGCTCTTTG 102181 || || ||| | || ||||||| ||||| | | || || ||| Sbjct 390327 GAA--CTCACGATTACTGTTTCCATCCCATATGTGAATATTTTTTTCTTGAAGTATTTTA 390384 Query 102182 CTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTCAACAACACCTCTCCAAAATACT 102241 ||| || || | |||||||| || ||||||| | || | | ||| |||||| Sbjct 390385 GCGTCTGTTTGACCATGAACAAACCACAGCAATTCTTCAGCGACCGCACGCCAGAATACT 390444 Query 102242 CTCTTAGTAGTTAAAAGTGGAAA 102264 | ||| |||||||| | |||||| Sbjct 390445 CGCTTTGTAGTTAATAATGGAAA 390467 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361091829291698