Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20oleae_20[refseq_20GCF_5F001188975.1_202015-07-29] 36,198 sequences; 471,780,370 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq28 145 5e-30 >seq28 Length=1372515 Score = 145 bits (160), Expect = 5e-30 Identities = 413/628 (66%), Gaps = 9/628 (1%) Strand=Plus/Plus Query 97007 TTGGGAAAGGCC-TGGGAGTTCGCGTAAGCTGCTCTGTGAGAGCATCAATGTGATTCACA 97065 || ||||| ||| | || |||| || | ||| ||||| || || ||||| ||||| | Sbjct 389845 TTAGGAAACGCCCTAGGTTTTCGTGTTAACTGTTCTGTTAGCGCTTCAATATGATTATTA 389904 Query 97066 TAAATGTGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGGAACTAAATCAGTGACATGG 97125 || | || ||||| || |||||||| | || || || || | |||||| | ||| Sbjct 389905 TAGACATGTGCATCACCCAAAGTGTGGACGAAATCCCCTGGCCGGAGATCAGTAATATGA 389964 Query 97126 GCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAGTCCCATA 97185 || ||||| | || | || || || ||||| ||||| || || || | |||||| Sbjct 389965 GCAATCATGTAGGTAAGTAAAGCGTACGAGGCAATATTAAATGGTACACCCAATCCCATG 390024 Query 97186 TCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAAAACTGACTC 97245 ||||| | ||| ||||| ||||| || | || ||||| ||| |||| || | Sbjct 390025 TCAGCACTGCGTTGGTATAATTGACAAGATAACTCTCCATTGGCAACAAAAAATTGTGTA 390084 Query 97246 AATACATGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACATTCCAAGCACACATC 97305 | |||||| || || | ||||||| |||| ||| | |||||||||| |||| Sbjct 390085 AGGCAATGACAAGGTGGTAGAGCCATTTGAGGAATATCGACTGGATTCCAAGCAGACATT 390144 Query 97306 AACATTCTTCTATCGGTTGGGTTTGTGTGT-ATGGTATTAATTATCTGCTTTAATTGATC 97364 | || | || ||| |||| || || | | | || | ||||| |||| | |||||| Sbjct 390145 ATAATACGTCGATCATTTGGATT-GTTTCTGACTGTGTCAATTACTTGCTGAAGTTGATC 390203 Query 97365 AACGCCTTCTCCACCATAATTGTGCTTAAGACCTTGATATTCTGCTCCAAAATGCCTCCA 97424 | || || | ||| ||| ||| | | || | || |||||||| | ||| Sbjct 390204 TATACCCTCATCTTTGTAAGTGTCCTTGCAATTTCTGTACTTGGCCCCAAAATGACGCCA 390263 Query 97425 TTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCACAGAAACCAAGCTTATC 97484 || || |||||||| || || || || ||||||||||| || | || ||| || || Sbjct 390264 CTGAAAACCATAAACTGGGCCTAGATCACCTTCTTCTCTGTCGGAAAACCCACATTTGTC 390323 Query 97485 TAAATAGGAC-CTAGAT--CCATTTGCATCCCAAATGTGCACACCAGATGCTGCAAGCTC 97541 || || || | ||| | ||| ||||||| ||||| | | | || ||| Sbjct 390324 TA---AGAACTCACGATTACTGTTTCCATCCCATATGTGAATATTTTTTTCTTGAAGTAT 390380 Query 97542 TTTGCTGTCAGTAGATCCTCTGATAAACCACAACAATTCTTCCACAACACCTCTCCAAAA 97601 ||| ||| || || | |||||||| ||||||||| | || | | ||| || Sbjct 390381 TTTAGCGTCTGTTTGACCATGAACAAACCACAGCAATTCTTCAGCGACCGCACGCCAGAA 390440 Query 97602 TACTCTCTTAGTTGTTAAGAGAGGaaaa 97629 ||||| ||| || ||||| | |||||| Sbjct 390441 TACTCGCTTTGTAGTTAATAATGGAAAA 390468 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346631011686860