Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20oleae_20[refseq_20GCF_5F001188975.1_202015-07-29] 36,198 sequences; 471,780,370 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq28 134 1e-26 >seq28 Length=1372515 Score = 134 bits (148), Expect = 1e-26 Identities = 408/624 (65%), Gaps = 16/624 (3%) Strand=Plus/Minus Query 20036 GAAATGAATTTCCCTTATTAACTACGAAACGGGTATTTTGGAAAGGCGTTGTTGAAGAGT 20095 ||||| ||||| ||||||||||| || || ||||| ||| | || | |||||| | Sbjct 390475 GAAATAGTTTTCCATTATTAACTACAAAGCGAGTATTCTGGCGTGCGGTCGCTGAAGAAT 390416 Query 20096 TATTATGGTTTATTAAAGGATCAACAAATTCTACCGAGCTTGTAGAAAAAGGAGTTAAGA 20155 | | |||||| || | || |||| | ||| ||| ||||||| || | | Sbjct 390415 TGCTGTGGTTTGTTCATGGTCAAACAGACGCTAAAATACTTCAAGAAAAAAATATTCACA 390356 Query 20156 TTTGGAGCGCACATGGATCTAAGC---AATTTTTACACAGCAATGGATTTGACAACCGTC 20212 | ||| | | | | ||| | | || ||| ||| ||| ||| | || | Sbjct 390355 TATGGGATGGAAACAG---TAATCGTGAGTTCTTAGACAAATGTGGGTTTTCCGACAGAG 390299 Query 20213 AAGAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATG 20272 |||| || ||| | || || || ||||| ||||| ||| | |||||||| || | || Sbjct 390298 AAGAAGGTGATCTAGGCCCAGTTTATGGTTTTCAGTGGCGTCATTTTGGGGCCAAGTACA 390239 Query 20273 ----TTGACATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATT 20328 ||| || | |||| | | || | || |||||||| | || | || ||| Sbjct 390238 GAAATTG-CAAGGACACTTACAAAGATG---AGGGTATAGATCAACTTCAGCAAGTAATT 390183 Query 20329 AATTTAATTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAA 20388 | | | | || || ||||| || || | ||||| | | || ||||| | Sbjct 390182 GACACAGTCAGAAACAATCCAAATGATCGACGTATTATAATGTCTGCTTGGAATCCAGTC 390123 Query 20389 GATGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGC-CAATTTTACGTTGCTAA 20447 ||| | ||| ||||||| | || || |||||| ||| | | ||||||| ||||| || Sbjct 390122 GATATTCCTCAAATGGCTCTACCACCTTGTCAT-TGCCTTACACAATTTTTTGTTGCCAA 390064 Query 20448 TAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTT 20507 | || || || |||||| | || ||||| ||||| |||||| ||||||| || || Sbjct 390063 TGGAGAGTTATCTTGTCAATTATACCAACGCAGTGCTGACATGGGATTGGGTGTACCATT 390004 Query 20508 CAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAAAAC 20567 |||||||| || || | ||||| || |||||||| ||| |||| ||| | | Sbjct 390003 TAATATTGCCTCGTACGCTTTACTTACCTACATGATTGCTCATATTACTGATCTCCGGCC 389944 Query 20568 GGGTGACTTAGTCCACACCATAGGAGACGCGCATATTTACCTTAATCATATAGAACCTTT 20627 || || || |||||||| | || || || ||| | || ||||||||| ||| | | Sbjct 389943 AGGGGATTTCGTCCACACTTTGGGTGATGCACATGTCTATAATAATCATATTGAAGCGCT 389884 Query 20628 AAAATTACAGTTAACACGACAACC 20651 || | ||||||||||||| |||| Sbjct 389883 AACAGAACAGTTAACACGAAAACC 389860 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399007894739110