Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20oleae_20[refseq_20GCF_5F001188975.1_202015-07-29] 36,198 sequences; 471,780,370 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq4 84.2 2e-11 >seq4 Length=3596895 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891 ||||| || || || || ||||| || ||||| || || || | || || ||| | | Sbjct 3259169 ATGCAAATCTTCGTGAAGACCTTGACTGGCAAGACCATCACTCTGGAGGTTGAACCATCC 3259228 Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951 || | | | |||| |||||| | || ||| | |||||||| | || || || Sbjct 3259229 GATACTATTGAAAATGTTAAAGCTAAGATTCAAGACAAAGAAGGAATCCCCCCAGATCAA 3259288 Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011 ||||||||||| | ||| || || ||||||||||| || || |||||||| | Sbjct 3259289 CAACGTTTAATCTTTGCCGGTAAGCAACTGGAAGACGGACGCACCTTGTCCGATTACAAC 3259348 Query 25012 ATACAGAAAGAGGCCACGCTTCATTTAGT 25040 || ||||| ||| | || |||||||| || Sbjct 3259349 ATCCAGAAGGAGTCTACACTTCATTTGGT 3259377 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418119459700160