Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20oleae_20[refseq_20GCF_5F001188975.1_202015-07-29]
36,198 sequences; 471,780,370 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq11 506 3e-138
seq1 280 2e-70
>seq11
Length=2963766
Score = 506 bits (560), Expect = 3e-138
Identities = 1255/1886 (67%), Gaps = 42/1886 (2%)
Strand=Plus/Minus
Query 70792 TTGTCCAATGTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATGCCT 70851
||||||| ||||| || || | | | |||| |||||| || | || ||||||||
Sbjct 1983220 TTGTCCACAGTAAATTGTATAGCATTTGCGGCGGGTTTCGTGCGCAAGTAATACATGCCA 1983161
Query 70852 GTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCTAGGA 70911
||||| ||||| |||| |||||||| || ||| || |||||| |||| | ||
Sbjct 1983160 GTTTTGAGACCTGCCTTCCAACCGTAAAAGTGTATAGAAGTAAGTTTGCCATAGTTTGGT 1983101
Query 70912 TCGGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCC 70971
|| || | ||| || || | ||||||||||||||||||||| || || | |||||||||
Sbjct 1983100 TCAGCCACGTGTATGTTGAACGACTGACTTTGATCGATGAAAGCGCCACGATCTGCAGCC 1983041
Query 70972 ATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATC 71030
||||| || || || | ||| ||||||| |||||| || || |||| || |||
Sbjct 1983040 ATTTTGATTGAGGTTTTCACAGAAATCTCCCAAACAGTTTTGTATAAATCGCGTA-TATG 1982982
Query 71031 TTCTGGAA-GGTTTGTAT--TCTGAATGGATCCACCATCTGCAATAATCCTATTTTTGAT 71087
| ||| | || || || | || || || || | | | ||||| ||||||| ||
Sbjct 1982981 CTGTGGTATGGATTCAATGTTTTGTATCGAGCCGCGACTAGTTATAATATTATTTTTCAT 1982922
Query 71088 CTCTTCATTCCATAATTTTCTCTCGGTTAAAACTC-TAAGGAGATGAGGATTAACTACTT 71146
|| |||| ||| || ||| |||| | | | ||| || ||| |||| || ||||
Sbjct 1982921 ATCATCATCCCACAAACCCAACTCAGTTAGATCGCGTAACAAG-TGATGATTTACAACTT 1982863
Query 71147 GAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGACT 71206
||||||| || || | || | || || || ||||| || || ||||| | |||||
Sbjct 1982862 GAAATTCACCCGAAAGCACACGGCGTGTATAGATATTGGAAGTGTATGGTTCAAATGACT 1982803
Query 71207 CATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGACTAT 71266
|||| || |||| |||||| || ||||| ||||| ||||| || || | || | | |
Sbjct 1982802 CATTGTTGCCCATAATTTGTGCTGTTGAAGCAGTTGGCATGGGCGCAAGCAGCAAAGAGT 1982743
Query 71267 TTCTAAGACCATGTGATCGGATTTTATCTTTTAGAGATTC---CCAATTCCAAAGATCCG 71323
| | || |||||| ||||| || || | |||| |||||||||||||||
Sbjct 1982742 TACGAACGCCATGTTGCTTAATTTTCTCCTTCA---ATTCGGTCCAATTCCAAAGATCAC 1982686
Query 71324 ATGGTACAACNNNNNNNNNNNNNNNNNNNNNNATGCCGTTACTAGCGTATGATCCTGCAT 71383
|||| || || |||||| || ||| ||| |||
Sbjct 1982685 TTGGTGTCTTATCCCACATGTCATACTGTAGAATACCCTTACTAACGGGTGAACCTACAT 1982626
Query 71384 ATGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGCTCCATAAT 71443
|||| || || | || | ||||||||||| ||| ||||| | || | || ||||| |
Sbjct 1982625 ATGTTTCATAAGTGCCATATTTTTCGGCTAATTCGCAACTGGATTCCAGCGCACCATAGT 1982566
Query 71444 AAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAATGGATAAT 71503
|||| |||||||| || | | ||| | |||||| || || ||||||||
Sbjct 1982565 AAATAGTTTCGAATATTTGTTGATTTAAGCGGAATGCTTCATCACTTTCGTATGGATAAC 1982506
Query 71504 TTAAGAGAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGTCTCT 71563
| | ||| || ||||| || || ||||| |||||||||||||| || | |||||
Sbjct 1982505 GCATTAAAATTAAAGCGTCGGCAAAACCTTGTACGCCAATACCGATGGGACGATGTCTGA 1982446
Query 71564 TATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGAT 71623
||| || | | || || || || ||||||| |||||| ||||| |||||||| | ||
Sbjct 1982445 AATTCGATTTCTTTGCCTCCGGTATTGGATAATGATTAATGTCTATGATTTTATTCAAAT 1982386
Query 71624 TTC---TGACTATTACTT--TGACCACATCCTTTAGTTTGAGAAAATCAAA---TCTCCC 71675
| | | || | ||| ||||| || || || ||| ||| | | || |
Sbjct 1982385 TACGTGTAACGGT--CTTGGTGACC---TCTTTGAGGCGCTTAAAGTCATACGTTTTCTC 1982331
Query 71676 ATCTATTACAAACACGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGC 71735
| | ||||||| |||||| || | || || | ||||| || |||||||||| |
Sbjct 1982330 GGGTGTGACAAACATGTTCAATGCGATCGAAGCTAAGTTACACACAGCTACCTCATCGGG 1982271
Query 71736 ATCGGCATATTGTATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTG 71795
| | ||||| | |||||| || || | |||||||||||| || || || | ||| ||
Sbjct 1982270 TGCCGAATATTCCACAATTTCGGTACATAAATTACTACACTTAATTGTGCCAACATTCTG 1982211
Query 71796 TTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAAT 71855
|||||||||||| ||||| ||||| ||||| | || |||| || ||||| || |
Sbjct 1982210 CTGATTACTCTTTCGATTACAAGCATCTTTATATAACATGTACGGTGTGCCAGTCTCTAC 1982151
Query 71856 CTGAGATTCTATAATCGCTTTCCAGACGAC-TCGAGCCTTTATTATATTCTT-GTATCTC 71913
|| ||||| ||||| || ||| | ||| | | || |||| | || || | | ||
Sbjct 1982150 TTGCGATTCAATAATGGCAAACCA-AAGACTTTGTGCTTTTACCTTCTTATTAGCACGTC 1982092
Query 71914 TTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAAT 71973
|| || ||| |||| ||| ||| ||| ||||| || ||||| | | | |||
Sbjct 1982091 CTTCCT-GTTCATATTTCAGATACAATTTTTCAAACTCCTCACCCCACACTTCATGTAAA 1982033
Query 71974 CCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATA 72033
|||||||||| | || ||||| | ||||| ||| ||| | | || ||| |||||
Sbjct 1982032 CCAGGACATTTGTGTGGGCACATTAGCGACCAGTCTTCATTGGCTTCGACACGTCTCATA 1981973
Query 72034 AAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCT 72093
|| |||||||| ||||| ||||| || | |||||||| | ||||| || || ||
Sbjct 1981972 AATAGATCAGGTATCCACAGAGCGTAGAACAAATCTCTGGCGCGGTGCTCTTCTTTACCG 1981913
Query 72094 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 72153
|| || || || | ||| | || | | ||||||| |||||| ||||||| ||| |||
Sbjct 1981912 GTGTTTTTCTTCAAATCCAAAAATTCGAATATATCAGCATGCCATGGTTCCAGGTAGATG 1981853
Query 72154 GCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 72213
|| | | || |||||||| || || ||||| | || | || ||||| |
Sbjct 1981852 GCAAAGGCGCCTGGCCGTTTACCGCCACCTTGATCCACATAACGTGCTACATTATTGAAC 1981793
Query 72214 ACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGT-CCCGGAGATATAGC--TT 72270
|||| || |||||| | | |||||| || | ||||| || |||| | || || |
Sbjct 1981792 ACTCGCAGCATTGGCACCAAACCATTCGAGGTGCCATTTGTGCCCGCA---ATCGCAGTG 1981736
Query 72271 CCACTGGCACGAAT--ATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTA 72328
|| | || || || | || ||| |||||| || || || || ||| || || |
Sbjct 1981735 CCTTTCGCGCGTATGCAATGTACATT--TAGACCAATACCACCAGCAGATTTTGAAATCA 1981678
Query 72329 ATGCGCATCG-TTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGT 72387
| || ||| | | | | | | | | || || || || ||| |||| |||| |||||
Sbjct 1981677 AAGCACATTGATGTGCAGATGTGA-AAATACCGTCAATGGAATCGTCCACCATGGTAAGT 1981619
Query 72388 AGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCG 72447
| || || |||| ||| | | | || | ||| || | || || |||||
Sbjct 1981618 AAGAAGCATGATGACAATTGCGGCTGTTTGGTGGCAGCAGCGAAGAGTGTCGGCGAAGCA 1981559
Query 72448 TGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCAT 72507
|| ||||| | || || || | ||||| || ||||| |||| || |||||
Sbjct 1981558 TGTGTAAAATAACGCTCGGAAAGCAAGTTGTATGTTTCAATTGCTGCATCGATATCTTCA 1981499
Query 72508 TGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTA 72567
|||||| || | || || ||||||||||||||||| |||| ||||| || ||| |
Sbjct 1981498 CCATGTATACCGATGGCAACGCGCATTAACATATGCTGTGGTCGCTCAACAATTTTGCCA 1981439
Query 72568 TTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAG 72627
|| | || | ||| ||||| ||| | ||||||||||||||||| ||||| |||
Sbjct 1981438 TTCAACTTGAGCAAATAGGAACGTTCAAGCGTTTTAAAACCAAAATAATTGTAACCAAAA 1981379
Query 72628 TCTCGTTCGTAAATAATAACCGAATT 72653
|| || || || || ||| | || ||
Sbjct 1981378 TCGCGGTCATATATGATAGCAGAGTT 1981353
>seq1
Length=5074932
Score = 280 bits (310), Expect = 2e-70
Identities = 499/724 (69%), Gaps = 7/724 (1%)
Strand=Plus/Plus
Query 41878 TCCCAATTCAGAAATCAATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACA 41937
||||| ||| || ||| | ||| || | ||||| ||||| ||| | || |||
Sbjct 4719455 TCCCAGTTCGACAAGCAAACGATCAGCCACAAATTCGATATAATCAGACATTAGTTTACA 4719514
Query 41938 ATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGAC 41997
|||||| || || | ||||| || | ||| |||| | |||||||| ||||| | ||
Sbjct 4719515 ATTCATACCGATTAAATTAACCGGCAAAGCGTCAGTTAAGAATTCTTGCTCAATTGTAAC 4719574
Query 41998 CGCGTCTGTTATAATAGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAA 42057
|| |||| || || | | ||| | ||| ||| | | ||||||| ||
Sbjct 4719575 AGCTTCTGAAATTATTTCAACAATTCGTTCATTACTTGGTTTTTGTATCAAATGTTGGAA 4719634
Query 42058 CATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAA 42117
||| ||||||||||| || || || ||||||||||||| |||| ||| || |||||
Sbjct 4719635 CATTAAACATGCGAAGTCACAATGTAGACCCTCATCTCGTGAGATTAGTTCATTAGAAAA 4719694
Query 42118 CGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGA 42177
|| | || ||||||| || || || ||||||||||| || || ||||| |||
Sbjct 4719695 TGTCAAGCCAGGCATTAAACCGCGTTTCTTAAGCCAAAAGATCGAAGCAAAACTGCCACT 4719754
Query 42178 AAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGC--ACTG 42235
||||| || ||||| || || ||||| ||||| | | || ||| | ||| |||
Sbjct 4719755 GAAGAAAATGCCTTCAACAGCGGCAAATGCAATTACACGTTCACCAAAGTTGGCCGACTT 4719814
Query 42236 TCATGTA-TCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTAT 42294
| | | |||| | |||||||| ||||| ||||| |||||| || || ||
Sbjct 4719815 AGAAGAAATCCAAGCAAGTGCCCAATCAGCCTTACGCTTTACCGCAGGCATTGTCTCAAT 4719874
Query 42295 GGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACT 42354
|| || || | || ||| ||| || ||| |||| ||| ||||| || || | |||
Sbjct 4719875 AGCGTTGAATAAGTAATTTCTTTGTTTCGAATCCTTAATATACGTATCAATTAATATACT 4719934
Query 42355 ATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTC 42414
||||||||| ||||| | ||||| || || || |||||||| ||||| || | |||||
Sbjct 4719935 ATACATTTCAGAATGCACATTTTCCATAGCAATTTGAAATCCATAGAAGCAACGTGCCTC 4719994
Query 42415 GGTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACT 42474
||||| || |||||| | || |||||| |||||||||| ||||| || || |||
Sbjct 4719995 TGTAACTTGCACTTCTTGGCTGAAGCGTTCAACTAAATTTTCATTCACAATACCATCAGA 4720054
Query 42475 GGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGT--CCGGTGTTAATTTA 42532
|| || || || || || || ||| || |||| | ||| | | ||| | |
Sbjct 4720055 TGCGGCGAAGAAGGCTAACACGTGTGAAATGAAATGTCGTTCATTATCAGTGAGACGT-- 4720112
Query 42533 TTCCAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCT 42592
|||||||| ||||||||||| | ||||||||| || || ||||| || |||||||||
Sbjct 4720113 GCCCAATCATCCATATCTTTAGAAAGATCTACTTCCTCAACTGTCCAGAACGATGCTTCT 4720172
Query 42593 GCCT 42596
||||
Sbjct 4720173 GCCT 4720176
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 670835526290480
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