Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20oleae_20[refseq_20GCF_5F001188975.1_202015-07-29] 36,198 sequences; 471,780,370 total letters Query= NC_006651.1 Length=19161 Score E Sequences producing significant alignments: (Bits) Value seq1525 87.8 2e-13 seq1545 86.0 8e-13 >seq1525 Length=49260 Score = 87.8 bits (96), Expect = 2e-13 Identities = 77/96 (80%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 3338 TTTTTGATAGGGTAGAAAAGGATGGTAAACTTTCAGCCAAATCAAAAGGGGTCAGGGTCA 3397 ||||| | || |||||| || || | ||| |||| || ||||| ||||||||| | | | Sbjct 33101 TTTTTAAAAGAGTAGAAGAGAATAGAAAAATTTCGGCGAAATCCAAAGGGGTCGGATTTA 33042 Query 3398 AAAATGGTTGATTTGGCGTGGAATGCCCCATAGATA 3433 ||| |||| |||||||||| |||||||||||| ||| Sbjct 33041 AAAGTGGTCGATTTGGCGTCGAATGCCCCATACATA 33006 >seq1545 Length=49295 Score = 86.0 bits (94), Expect = 8e-13 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 3337 GTTTTTGATAGGGTAGAAAAGGATGGTAAACTTTCAGCCAAATCAAAAGGGGTCAGGGTC 3396 |||||| | ||||||||| || || | || ||||||| ||||| ||||||| | | | Sbjct 33617 GTTTTTTAAAGGGTAGAAGAGAATAGAAACATTTCAGCGAAATCTAAAGGGGGCGGATTT 33558 Query 3397 AAAAATGGTTGATTTGGCGTGGAATGCCCCAT 3428 |||| |||| ||||||||||||||| |||||| Sbjct 33557 AAAAGTGGTCGATTTGGCGTGGAATACCCCAT 33526 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 61171186729576