Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20oleae_20[refseq_20GCF_5F001188975.1_202015-07-29]
36,198 sequences; 471,780,370 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq15 98.7 1e-15
seq385 86.0 6e-12
seq4 82.4 7e-11
>seq15
Length=2140121
Score = 98.7 bits (108), Expect = 1e-15
Identities = 165/239 (69%), Gaps = 0/239 (0%)
Strand=Plus/Minus
Query 26757 TAGTCAAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAA 26816
||| | | || |||||| | || || ||||| |||||||| || | |||||| | ||
Sbjct 600456 TAGACGAGCAGAATGCAGATTTTCGTCAAAACCTTAACTGGTAAGACCATCACCTTAGAG 600397
Query 26817 TTAGAATCAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATA 26876
| || | ||||||||||| | |||||| || || |||||||| || ||
Sbjct 600396 GTCGAGCCTTCTGACACCATCGAAAATGTCAAAGCTAAAATCCAAGACAAAGAGGGTATC 600337
Query 26877 CCTCCCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTC 26936
|| || || ||||| | | || | || ||| |||||| | ||||||| | | | | |
Sbjct 600336 CCCCCAGACCAACAGCGTTTGATCTTCGCCGGAAAACAATTAGAAGATGGTCGCACCTTG 600277
Query 26937 AGCGACTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
|||||| ||||||||||| || || || |||| |||| ||| | ||| |||| ||
Sbjct 600276 TCCGACTACAACATTCAAAAGGAGTCAACACTCCACTTGGTTCTGCGTCTTCGAGGTGG 600218
>seq385
Length=177728
Score = 86.0 bits (94), Expect = 6e-12
Identities = 134/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 71672 ACGCATGATGAACTATGGAATGCTGCTCAGCGACAGCTACGCAATGAGGGTAAAATTCAC 71731
|| || || || ||||||||||| || || |||| | ||| || ||||| ||
Sbjct 118989 ACCCACGACGATCTATGGAATGCAGCACAAATACAGTTGTTGCGTGAAGGCAAAATGCAT 118930
Query 71732 GGATACCTACGCATGTACTGGGCCAAAAAGATTCTCGAGTGGACTCAAACTCCCGAGCAG 71791
|| | || || ||||| ||||| || ||||| || |||||| | ||| ||||| |
Sbjct 118929 GGTTTTCTTCGTATGTATTGGGCAAAGAAGATCCTGGAGTGGTATTCAACACCCGAAGCG 118870
Query 71792 GCGCTCGAGTATTCTATTTATCTAAACGATAGATACAGTCTCGACGGTCGCGATCCTAAC 71851
|| || || | | |||| | |||| |||| ||| ||| | || ||| |||||||||
Sbjct 118869 GCTCTAGAAACTGCAATTTCTTTAAATGATAAATATAGTTTGGATGGTTTAGATCCTAAC 118810
Query 71852 GGTTATGTCGGT 71863
|| ||||| |||
Sbjct 118809 GGCTATGTTGGT 118798
>seq4
Length=3596895
Score = 82.4 bits (90), Expect = 7e-11
Identities = 146/211 (69%), Gaps = 4/211 (2%)
Strand=Plus/Plus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
|||||| | || || || || | || || ||| | |||||| | ||| | ||| || |
Sbjct 3261067 ATGCAAATTTTCGTGAAGACCCTCACCGGCAAAACCATCACCTTGGAAGTTGAACCATCC 3261126
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
|||||||| || | |||||| ||||| || || ||||| || || || ||||||
Sbjct 3261127 GACACCATAGAAAATGTCAAAGCCAAGATCCAGGATAAGGAAGGCATTCCCCCAGATCAA 3261186
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAAC--GTCAGCGACTATA 26946
||| | | || | || ||| || ||| | || || | | | | ||||| |||| |
Sbjct 3261187 CAACGTTTGATCTTCGCCGGTAAGCAATTGGAGGACGGACGCACCCTGTCAG--ACTACA 3261244
Query 26947 ACATTCAAAAAGAATCTACTATCCATCTGGT 26977
|||||||||| ||||| ||| | || ||||
Sbjct 3261245 ACATTCAAAAGGAATCAACTCTTCACTTGGT 3261275
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478445817230560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |