Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20oleae_20[refseq_20GCF_5F001188975.1_202015-07-29] 36,198 sequences; 471,780,370 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq15 98.7 1e-15 seq385 86.0 6e-12 seq4 82.4 7e-11 >seq15 Length=2140121 Score = 98.7 bits (108), Expect = 1e-15 Identities = 165/239 (69%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 26757 TAGTCAAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAA 26816 ||| | | || |||||| | || || ||||| |||||||| || | |||||| | || Sbjct 600456 TAGACGAGCAGAATGCAGATTTTCGTCAAAACCTTAACTGGTAAGACCATCACCTTAGAG 600397 Query 26817 TTAGAATCAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATA 26876 | || | ||||||||||| | |||||| || || |||||||| || || Sbjct 600396 GTCGAGCCTTCTGACACCATCGAAAATGTCAAAGCTAAAATCCAAGACAAAGAGGGTATC 600337 Query 26877 CCTCCCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTC 26936 || || || ||||| | | || | || ||| |||||| | ||||||| | | | | | Sbjct 600336 CCCCCAGACCAACAGCGTTTGATCTTCGCCGGAAAACAATTAGAAGATGGTCGCACCTTG 600277 Query 26937 AGCGACTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 |||||| ||||||||||| || || || |||| |||| ||| | ||| |||| || Sbjct 600276 TCCGACTACAACATTCAAAAGGAGTCAACACTCCACTTGGTTCTGCGTCTTCGAGGTGG 600218 >seq385 Length=177728 Score = 86.0 bits (94), Expect = 6e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 71672 ACGCATGATGAACTATGGAATGCTGCTCAGCGACAGCTACGCAATGAGGGTAAAATTCAC 71731 || || || || ||||||||||| || || |||| | ||| || ||||| || Sbjct 118989 ACCCACGACGATCTATGGAATGCAGCACAAATACAGTTGTTGCGTGAAGGCAAAATGCAT 118930 Query 71732 GGATACCTACGCATGTACTGGGCCAAAAAGATTCTCGAGTGGACTCAAACTCCCGAGCAG 71791 || | || || ||||| ||||| || ||||| || |||||| | ||| ||||| | Sbjct 118929 GGTTTTCTTCGTATGTATTGGGCAAAGAAGATCCTGGAGTGGTATTCAACACCCGAAGCG 118870 Query 71792 GCGCTCGAGTATTCTATTTATCTAAACGATAGATACAGTCTCGACGGTCGCGATCCTAAC 71851 || || || | | |||| | |||| |||| ||| ||| | || ||| ||||||||| Sbjct 118869 GCTCTAGAAACTGCAATTTCTTTAAATGATAAATATAGTTTGGATGGTTTAGATCCTAAC 118810 Query 71852 GGTTATGTCGGT 71863 || ||||| ||| Sbjct 118809 GGCTATGTTGGT 118798 >seq4 Length=3596895 Score = 82.4 bits (90), Expect = 7e-11 Identities = 146/211 (69%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || || || || | || || ||| | |||||| | ||| | ||| || | Sbjct 3261067 ATGCAAATTTTCGTGAAGACCCTCACCGGCAAAACCATCACCTTGGAAGTTGAACCATCC 3261126 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 |||||||| || | |||||| ||||| || || ||||| || || || |||||| Sbjct 3261127 GACACCATAGAAAATGTCAAAGCCAAGATCCAGGATAAGGAAGGCATTCCCCCAGATCAA 3261186 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAAC--GTCAGCGACTATA 26946 ||| | | || | || ||| || ||| | || || | | | | ||||| |||| | Sbjct 3261187 CAACGTTTGATCTTCGCCGGTAAGCAATTGGAGGACGGACGCACCCTGTCAG--ACTACA 3261244 Query 26947 ACATTCAAAAAGAATCTACTATCCATCTGGT 26977 |||||||||| ||||| ||| | || |||| Sbjct 3261245 ACATTCAAAAGGAATCAACTCTTCACTTGGT 3261275 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478445817230560