Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20oleae_20[refseq_20GCF_5F001188975.1_202015-07-29] 36,198 sequences; 471,780,370 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq4 95.1 1e-14 seq138 82.4 6e-11 >seq4 Length=3596895 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| ||||| |||||||| | |||||||||||||| || | || ||| | | Sbjct 3259397 ATGCAGATTTTCGTCAAAACTTTGACGGGAAAAACCATCACTTTGGAGGTTGAGCCTTCC 3259456 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 || ||| ||| | || ||| |||||| ||||| ||||| ||||| ||||| Sbjct 3259457 GATACTATTGAGAATGTCAAAGCTAAAATTCAAGATAAGGAAGGAATCCCCCCAGATCAA 3259516 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 ||| | | |||| || |||||||| || || |||| || || |||||||||| Sbjct 3259517 CAACGTTTGATTTTCGCTGGCAAACAGTTGGAGGATGGACGCACACTGTCCGATTATAAT 3259576 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||||| || || || ||| ||||| | || | | ||||| || || Sbjct 3259577 ATTCAGAAGGAATCCACTTTACATTTAGTTCTACGCTTGCGTGGTGG 3259623 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||| || || || || ||||| || |||||||| ||| | ||| ||| || Sbjct 3260839 ATGCAAATCTTCGTGAAGACCCTCACTGGCAAAACCATCACCTTGGAAGTAGAGCCCTCA 3260898 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 || || ||| | || || || || ||||| |||||| | || ||||| Sbjct 3260899 GATACCATTGAGAACGTTAAGGCTAAGATCCAAGATAAGGAAGGCATTCCACCAGATCAA 3260958 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 ||| | || || | || || || || || ||||| | ||| || ||||||||||| Sbjct 3260959 CAACGTCTGATCTTCGCCGGTAAGCAGTTGGAAGACGGTCGCACCCTGTCCGATTATAAC 3261018 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 || || |||||||||||| | || |||| ||| | ||||| || || Sbjct 3261019 ATCCAGAAAGAGTCTACTCTTCACTTGGTATTGCGTTTGCGTGGTGG 3261065 >seq138 Length=433312 Score = 82.4 bits (90), Expect = 6e-11 Identities = 141/205 (69%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 |||||||||||| || ||||| || ||||| || ||||| || | || || | Sbjct 21528 AATGCAAATTTTCGTAAAAACCCTTACGGGCAAGACCATCACTCTTGAGGTTGAACCTTC 21587 Query 115345 CGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 || ||| ||| ||| || || |||||| ||||| ||||| | || ||||| Sbjct 21588 GGATACTATTGAACATGTTAAGGCCAAAATTCAAGATAAGGAAGGTATTCCGCCAGATCA 21647 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 || | || |||| ||| || ||||| || || |||| || |||| || ||||| Sbjct 21648 ACAGCGTCTAATTTTTGCCGGAAAACAGTTGGAGGATGGTCGCACATTGGCTGACTATAA 21707 Query 115465 CATTCAAAAAGAGTCTACTATACAT 115489 ||||| ||||||||||| ||||| Sbjct 21708 TATTCAGAAAGAGTCTACGTTACAT 21732 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425156353911760