Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20oleae_20[refseq_20GCF_5F001188975.1_202015-07-29] 36,198 sequences; 471,780,370 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq15 100 2e-16 >seq15 Length=2140121 Score = 100 bits (110), Expect = 2e-16 Identities = 163/233 (70%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || ||||| || | ||| |||| || || || ||||||||||| ||||||||||||| | Sbjct 600218 CCACCTCGAAGACGCAGAACCAAGTGGAGTGTTGACTCCTTTTGAATGTTGTAGTCGGAC 600277 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | || || |||||||| || || | || | ||||||||||| || Sbjct 600278 AAGGTGCGACCATCTTCTAATTGTTTTCCGGCGAAGATCAAACGCTGTTGGTCTGGGGGG 600337 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||||||||||| || || ||| || || | | | ||||| ||||| Sbjct 600338 ATACCCTCTTTGTCTTGGATTTTAGCT--TTGACATTTTCGATGGTGTCAGAAGGCTCGA 600395 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTG 16939 || | ||||||||| || || || | |||||||| |||||||||||| || Sbjct 600396 CCTCTAAGGTGATGGTCTTACCAGTTAAGGTTTTGACGAAAATCTGCATTCTG 600448 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 404909290112020